RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 PICALMQ13492 652 aa13.91□□□□□ -0.18
MTHFD1-211ENST00000555709 SBK1Q52WX2 424 aa13.91□□□□□ -0.18
MTHFD1-211ENST00000555709 CTR9Q6PD62 1173 aa13.91□□□□□ -0.18
MTHFD1-211ENST00000555709 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
MTHFD1-211ENST00000555709 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
MTHFD1-211ENST00000555709 TMOD2Q9NZR1 351 aa13.91□□□□□ -0.18
MTHFD1-211ENST00000555709 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 USP17L21D6R901 530 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 CYP2D6P10635 497 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 EVX2Q03828 476 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 PPARAQ07869 468 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 IMMTQ16891 758 aaKnown RBP13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 TSGA10IPQ3SY00 556 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 KIF2CQ99661 725 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 SEMA6BQ9H3T3 888 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 ANAPC4Q9UJX5 808 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
MTHFD1-211ENST00000555709 SMIM22K7EJ46 135 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 INPP5BP32019 993 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 HAND2P61296 217 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 C12orf60Q5U649 245 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 SH3BP5LQ7L8J4 393 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 FAM83AQ86UY5 434 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 SAP30BPQ9UHR5 308 aaKnown RBP13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 OGDHLQ9ULD0 1010 aa13.89□□□□□ -0.19
MTHFD1-211ENST00000555709 MYH8P13535 1937 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 ZNF213O14771 459 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 COL6A1P12109 1028 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 ZKSCAN1P17029 563 aaPredicted RBP13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 FAM151AQ8WW52 585 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 TACC3Q9Y6A5 838 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 BDP1A6H8Y1 2624 aa13.88□□□□□ -0.19
MTHFD1-211ENST00000555709 TMEM265A0A087WTH1 108 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 E7EWF7 191 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 FGRP09769 529 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 PLCD1P51178 756 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 CTDSPL2Q05D32 466 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 TCP10Q12799 353 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 ADCK5Q3MIX3 580 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 EHD4Q9H223 541 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 NEDD4P46934 1319 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 DNAH12Q6ZR08 3092 aa13.87□□□□□ -0.19
MTHFD1-211ENST00000555709 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 GABPAQ06546 454 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 COL9A3Q14050 684 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 KRT32Q14532 448 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 AKNAD1Q5T1N1 836 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 AMOTL1Q8IY63 956 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 DHX36Q9H2U1 1008 aaKnown RBP13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 GREB1LQ9C091 1923 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 PIEZO1Q92508 2521 aa13.86□□□□□ -0.19
MTHFD1-211ENST00000555709 HMGCRP04035 888 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 PCP11498 1178 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 TRIM32Q13049 653 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 LRRC26Q2I0M4 334 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 DCAF15Q66K64 600 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 MIGA2Q7L4E1 593 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 TTC6Q86TZ1 520 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 METTL16Q86W50 562 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 TM6SF1Q9BZW5 370 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 HMX1Q9NP08 348 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
MTHFD1-211ENST00000555709 CXCL11O14625 94 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 ORC4O43929 436 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 FOSL2P15408 326 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 NOL9Q5SY16 702 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 USP38Q8NB14 1042 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 SLC44A5Q8NCS7 719 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 DYNLL2Q96FJ2 89 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 JAKMIP1Q96N16 626 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 RNF41Q9H4P4 317 aaPredicted RBP13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 DNAJC18Q9H819 358 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
MTHFD1-211ENST00000555709 SLC3A2P08195 630 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 RABEP1Q15276 862 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 COA7Q96BR5 231 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms