RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TOGARAM2Q6ZUX3 1019 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 USP49Q70CQ1 688 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 RSRC2Q7L4I2 434 aaKnown RBP18.36■□□□□ 0.53
TUBB3-209ENST00000555609 GRAMD1CQ8IYS0 662 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
TUBB3-209ENST00000555609 LRRN4CLQ8ND94 238 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 MYH6P13533 1939 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 PPP1R3GB7ZBB8 358 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 NPHP1O15259 732 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 PPP2R3AQ06190 1150 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 GOLGA8FQ08AF8 430 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 GOLGA8DPQ0D2H9 430 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 IGSF22Q8N9C0 903 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 CTCFLQ8NI51 663 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-209ENST00000555609 RMND1Q9NWS8 449 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
TUBB3-209ENST00000555609 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 FANCGO15287 622 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 SIK1P57059 783 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 ARL6IP4Q66PJ3 421 aaKnown RBP18.35■□□□□ 0.53
TUBB3-209ENST00000555609 FNBP4Q8N3X1 1017 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-209ENST00000555609 GOLGA1Q92805 767 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 SHISA4Q96DD7 197 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 EPSTI1Q96J88 318 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 LIMA1Q9UHB6 759 aaKnown RBP18.35■□□□□ 0.53
TUBB3-209ENST00000555609 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
TUBB3-209ENST00000555609 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 GTPBP6O43824 516 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-209ENST00000555609 CALML3P27482 149 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 RASGRP2Q7LDG7 609 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 FAM177A1Q8N128 213 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-209ENST00000555609 ANKRD20A12PQ8NF67 263 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-209ENST00000555609 WDR24Q96S15 920 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 RWDD2AQ9UIY3 292 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 TTF2Q9UNY4 1162 aaKnown RBP18.34■□□□□ 0.53
TUBB3-209ENST00000555609 ADGRG1Q9Y653 693 aa18.34■□□□□ 0.53
TUBB3-209ENST00000555609 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 CACNA1SQ13698 1873 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 A0A087X0B3 334 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 CCDC66A2RUB6 948 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 KIF5CO60282 957 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 MFAP3LO75121 409 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.53
TUBB3-209ENST00000555609 CTR9Q6PD62 1173 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 TMTC1Q8IUR5 882 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.53
TUBB3-209ENST00000555609 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
TUBB3-209ENST00000555609 AFMP43652 599 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 RBL2Q08999 1139 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 NPY5RQ15761 445 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 E2F4Q16254 413 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 FBXO33Q7Z6M2 555 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 CEP112Q8N8E3 955 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 CRNKL1Q9BZJ0 848 aaKnown RBP18.33■□□□□ 0.52
TUBB3-209ENST00000555609 MYO1AQ9UBC5 1043 aa18.33■□□□□ 0.52
TUBB3-209ENST00000555609 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 SCG2P13521 617 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 CD44P16070 742 aaKnown RBP18.32■□□□□ 0.52
TUBB3-209ENST00000555609 KIF5BP33176 963 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 PTGDRQ13258 359 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 ZNF174Q15697 407 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 PFKFB3Q16875 520 aaPredicted RBP18.32■□□□□ 0.52
TUBB3-209ENST00000555609 HSP90AA4PQ58FG1 418 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 CCDC178Q5BJE1 867 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 EARS2Q5JPH6 523 aaKnown RBP18.32■□□□□ 0.52
TUBB3-209ENST00000555609 SLC10A5Q5PT55 438 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 TEX35Q5T0J7 233 aa18.32■□□□□ 0.52
TUBB3-209ENST00000555609 TEX33O43247 280 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 MYL1P05976 194 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 PLA2G4AP47712 749 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 BRD3Q15059 726 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 UBXN6Q9BZV1 441 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
TUBB3-209ENST00000555609 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-209ENST00000555609 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 TUBBP07437 444 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 TXLNAP40222 546 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 GYG1P46976 350 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 NLRP5P59047 1200 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 DDB1Q16531 1140 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 ZNF772Q68DY9 489 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-209ENST00000555609 PDXDC2PQ6P474 469 aa18.31■□□□□ 0.52
TUBB3-209ENST00000555609 CCDC12Q8WUD4 166 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-209ENST00000555609 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-209ENST00000555609 DYNLL1P63167 89 aaKnown RBP18.3■□□□□ 0.52
TUBB3-209ENST00000555609 ZNF658Q5TYW1 1059 aaPredicted RBP18.3■□□□□ 0.52
TUBB3-209ENST00000555609 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
TUBB3-209ENST00000555609 SRGAP1Q7Z6B7 1085 aa18.3■□□□□ 0.52
TUBB3-209ENST00000555609 ARFGAP3Q9NP61 516 aa18.3■□□□□ 0.52
TUBB3-209ENST00000555609 CDC23Q9UJX2 597 aa18.3■□□□□ 0.52
TUBB3-209ENST00000555609 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
TUBB3-209ENST00000555609 COL1A1P02452 1464 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms