RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 FSD1Q9BTV5 496 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 VCPKMTQ9H867 229 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 PAK6Q9NQU5 681 aaPredicted RBP14.16□□□□□ -0.14
VRK1-204ENST00000555351 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
VRK1-204ENST00000555351 M0R2C6 588 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
VRK1-204ENST00000555351 CNMDO75829 334 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 SGPL1O95470 568 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 Q3C1V9 767 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 GPR142Q7Z601 462 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 PLEKHH3Q7Z736 793 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 PAGR1Q9BTK6 254 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
VRK1-204ENST00000555351 SYNPO2Q9UMS6 1093 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 DOCK3Q8IZD9 2030 aa14.15□□□□□ -0.14
VRK1-204ENST00000555351 RLFQ13129 1914 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 RASA1P20936 1047 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 RGS2P41220 211 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 TDO2P48775 406 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 MORN1Q5T089 497 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 IFNL3Q8IZI9 196 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 SHCBP1Q8NEM2 672 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 U2AF1L4Q8WU68 220 aaKnown RBP14.14□□□□□ -0.15
VRK1-204ENST00000555351 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 UNC93B1Q9H1C4 597 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 PORCNQ9H237 461 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 GOPCQ9HD26 462 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 RPTORQ8N122 1335 aa14.14□□□□□ -0.15
VRK1-204ENST00000555351 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 SLC15A5A6NIM6 579 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 SMIM22K7EJ46 135 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 STRNO43815 780 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 MYCP01106 439 aaPredicted RBP14.13□□□□□ -0.15
VRK1-204ENST00000555351 APPP05067 770 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 SLC3A2P08195 630 aaKnown RBP14.13□□□□□ -0.15
VRK1-204ENST00000555351 EEF2P13639 858 aaKnown RBP14.13□□□□□ -0.15
VRK1-204ENST00000555351 MAP3K21Q5TCX8 1036 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 APBA2Q99767 749 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK1-204ENST00000555351 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 OSBPL3Q9H4L5 887 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 HELLSQ9NRZ9 838 aa14.13□□□□□ -0.15
VRK1-204ENST00000555351 PLIN4Q96Q06 1357 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 HOXC6P09630 235 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 PTPREP23469 700 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 DSG3P32926 999 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 PDE4BQ07343 736 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 PPP4R3BQ5MIZ7 849 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 ZNF444Q8N0Y2 327 aaPredicted RBP14.12□□□□□ -0.15
VRK1-204ENST00000555351 ANKLE1Q8NAG6 615 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.12□□□□□ -0.15
VRK1-204ENST00000555351 NAPBQ9H115 298 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 HMX1Q9NP08 348 aaPredicted RBP14.12□□□□□ -0.15
VRK1-204ENST00000555351 BTBD7Q9P203 1132 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 ADAMTS5Q9UNA0 930 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 IVNS1ABPQ9Y6Y0 642 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 PARP14Q460N5 1801 aa14.12□□□□□ -0.15
VRK1-204ENST00000555351 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 FLOT1O75955 427 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
VRK1-204ENST00000555351 CYP2B6P20813 491 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 NUCB1Q02818 461 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 GRB14Q14449 540 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 ALX1Q15699 326 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 KIAA1755Q5JYT7 1200 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 ABRAQ8N0Z2 381 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 TRIB2Q92519 343 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 MKL1Q969V6 931 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 SEC62Q99442 399 aaKnown RBP14.11□□□□□ -0.15
VRK1-204ENST00000555351 SPATC1LQ9H0A9 340 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 MROH8Q9H579 483 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 CWC22Q9HCG8 908 aaKnown RBP14.11□□□□□ -0.15
VRK1-204ENST00000555351 BRCA2P51587 3418 aa14.11□□□□□ -0.15
VRK1-204ENST00000555351 PEX10O60683 326 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 SLC25A27O95847 323 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 EXOC6Q8TAG9 804 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 DEFB118Q96PH6 123 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 HTATIP2Q9BUP3 242 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 MOV10L1Q9BXT6 1211 aaKnown RBP14.1□□□□□ -0.15
VRK1-204ENST00000555351 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 ANAPC4Q9UJX5 808 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 ZMYM6O95789 1325 aa14.1□□□□□ -0.15
VRK1-204ENST00000555351 FARP2O94887 1054 aaPredicted RBP14.09□□□□□ -0.15
VRK1-204ENST00000555351 IGHDP01880 384 aa14.09□□□□□ -0.15
VRK1-204ENST00000555351 TFRCP02786 760 aaKnown RBP14.09□□□□□ -0.15
VRK1-204ENST00000555351 COPB2P35606 906 aa14.09□□□□□ -0.15
VRK1-204ENST00000555351 PPARAQ07869 468 aa14.09□□□□□ -0.15
VRK1-204ENST00000555351 MCMDC2Q4G0Z9 681 aa14.09□□□□□ -0.15
VRK1-204ENST00000555351 SPICE1Q8N0Z3 855 aa14.09□□□□□ -0.15
VRK1-204ENST00000555351 NEDD1Q8NHV4 660 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms