RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CNGA4Q8IV77 575 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 SUGP1Q8IWZ8 645 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 CTAGE4Q8IX94 777 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 AIFM3Q96NN9 605 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 FOXP1Q9H334 677 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 SENP2Q9HC62 589 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 MAN1B1Q9UKM7 699 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 NRAPQ86VF7 1730 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 EIF3CLB5ME19 914 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 MMP1P03956 469 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 RXRAP19793 462 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 GUCY2CP25092 1073 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 PLCD1P51178 756 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 ADKP55263 362 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 MCM6Q14566 821 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 LONRF3Q496Y0 759 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 RILPL1Q5EBL4 403 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 PPFIBP1Q86W92 1011 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 NOSTRINQ8IVI9 506 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 EIF3CQ99613 913 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 CYP7A1P22680 504 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 HSPA1LP34931 641 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 PBX1P40424 430 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 PPARAQ07869 468 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 GOLGA8FQ08AF8 430 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 ITPK1Q13572 414 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 SF3B3Q15393 1217 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 BARGINQ6ZT62 677 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 FOXP4Q8IVH2 680 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 SPATA20Q8TB22 786 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 ESR2Q92731 530 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 PNKPQ96T60 521 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 NAPGQ99747 312 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 IQSEC3Q9UPP2 1182 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 FAN1Q9Y2M0 1017 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 BCL9LQ86UU0 1499 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 PRKAB2O43741 272 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 BMP6P22004 513 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 PDE4BQ07343 736 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 KARSQ15046 597 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 KIF4BQ2VIQ3 1234 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 CRACR2BQ8N4Y2 399 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 ZNF831Q5JPB2 1677 aa12.09□□□□□ -0.47
MTHFD1-210ENST00000555252 MYH2Q9UKX2 1941 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 XBP1P17861 261 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 GYS2P54840 703 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 TRIM14Q14142 442 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 RRP12Q5JTH9 1297 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 MYL10Q9BUA6 226 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 BSDC1Q9NW68 430 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 TACC3Q9Y6A5 838 aa12.08□□□□□ -0.48
MTHFD1-210ENST00000555252 A0A087WUV0 522 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 MFAP3LO75121 409 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 SPATA1Q5VX52 437 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 LRRC31Q6UY01 552 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 DIS3L2Q8IYB7 885 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 ZNF654Q8IZM8 581 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 DESI2Q9BSY9 194 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 RNF26Q9BY78 433 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 TARSL2A2RTX5 802 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 SOWAHDA6NJG2 315 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 SNAP23O00161 211 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 CALM1P0DP23 149 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 CALM2P0DP24 149 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 CALM3P0DP25 149 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 PTPREP23469 700 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■■■□□ 16.7
MTHFD1-210ENST00000555252 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 RAD9BQ6WBX8 426 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms