RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 CDC37L1Q7L3B6 337 aa11.78□□□□□ -0.52
CCNK-204ENST00000555049 GPATCH11Q8N954 259 aa11.78□□□□□ -0.52
CCNK-204ENST00000555049 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
CCNK-204ENST00000555049 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
CCNK-204ENST00000555049 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
CCNK-204ENST00000555049 ARFGAP3Q9NP61 516 aa11.78□□□□□ -0.52
CCNK-204ENST00000555049 A1CFQ9NQ94 594 aaKnown RBP11.78□□□□□ -0.52
CCNK-204ENST00000555049 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
CCNK-204ENST00000555049 LMAN1P49257 510 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 APLP1P51693 650 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
CCNK-204ENST00000555049 BRD3Q15059 726 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 CST9Q5W186 159 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.53
CCNK-204ENST00000555049 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
CCNK-204ENST00000555049 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 MRIQ9BWK5 157 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
CCNK-204ENST00000555049 PIH1D3Q9NQM4 214 aaKnown RBP11.77□□□□□ -0.53
CCNK-204ENST00000555049 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.53
CCNK-204ENST00000555049 SUFUQ9UMX1 484 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 DAGLAQ9Y4D2 1042 aa11.77□□□□□ -0.53
CCNK-204ENST00000555049 CEP350Q5VT06 3117 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 MAST3O60307 1309 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 PITPNM2Q9BZ72 1349 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
CCNK-204ENST00000555049 HSPA4P34932 840 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 MECOMQ03112 1051 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 PRAMEF18Q5VWM3 479 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 ZDHHC15Q96MV8 337 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 MTMR6Q9Y217 621 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 AKAP11Q9UKA4 1901 aa11.76□□□□□ -0.53
CCNK-204ENST00000555049 CCDC151A5D8V7 595 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 PPP1R12AO14974 1030 aaPredicted RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 CACNB3P54284 484 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 PDE1AP54750 535 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 ETF1P62495 437 aaKnown RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 FCHSD1Q86WN1 690 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 SULF1Q8IWU6 871 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 HNRNPLLQ8WVV9 542 aaKnown RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 NSUN4Q96CB9 384 aaKnown RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 PPP1R13BQ96KQ4 1090 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 TTC14Q96N46 770 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 TOMM22Q9NS69 142 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 ZNF70Q9UC06 446 aaPredicted RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 MAP2K7O14733 419 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 ATP5JP18859 108 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 PDCP20941 246 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 IQCB1Q15051 598 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 SPTY2D1Q68D10 685 aaPredicted RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 TADA2BQ86TJ2 420 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 DZIP1Q86YF9 867 aaKnown RBP11.75□□□□□ -0.53
CCNK-204ENST00000555049 RABGGTAQ92696 567 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 VEZTQ9HBM0 779 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 LRP2BPQ9P2M1 347 aa11.75□□□□□ -0.53
CCNK-204ENST00000555049 GAKO14976 1311 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 SALL3Q9BXA9 1300 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 MYO1BO43795 1136 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
CCNK-204ENST00000555049 CHMLP26374 656 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
CCNK-204ENST00000555049 STX1AQ16623 288 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 ADGRA1Q86SQ6 560 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCNK-204ENST00000555049 FUT8Q9BYC5 575 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 DEFB129Q9H1M3 183 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
CCNK-204ENST00000555049 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 GOLGA6L9A6NEM1 432 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 TCP10L2B9ZVM9 353 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 SASH3O75995 380 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 SMC2O95347 1197 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 TUBBP07437 444 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
CCNK-204ENST00000555049 CDC42EP5Q6NZY7 148 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
CCNK-204ENST00000555049 APOBEC3FQ8IUX4 373 aaKnown RBP11.73□□□□□ -0.53
CCNK-204ENST00000555049 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
CCNK-204ENST00000555049 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
CCNK-204ENST00000555049 MYH15Q9Y2K3 1946 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 GOLIM4O00461 696 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 PPFIA4O75335 1185 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
CCNK-204ENST00000555049 ERCC3P19447 782 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 RASA3Q14644 834 aa11.72□□□□□ -0.53
CCNK-204ENST00000555049 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
CCNK-204ENST00000555049 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms