RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-206ENST00000555046 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 HMGCS2P54868 508 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 JAG1P78504 1218 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 CTDSPL2Q05D32 466 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 RNF20Q5VTR2 975 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 FAM43AQ8N2R8 423 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 GTF3C2Q8WUA4 911 aaPredicted RBP12.52□□□□□ -0.41
TMEM260-206ENST00000555046 TTC14Q96N46 770 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 RAPGEFL1Q9UHV5 662 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 TMX2Q9Y320 296 aa12.52□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 TLR2O60603 784 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 PRDM1O75626 825 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 REC8O95072 547 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 TTLL1O95922 423 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 PLA2G5P39877 138 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 GCLCP48506 637 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-206ENST00000555046 IRX3P78415 501 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-206ENST00000555046 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 KIF22Q14807 665 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 GPAT2Q6NUI2 795 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM260-206ENST00000555046 SMCR8Q8TEV9 937 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-206ENST00000555046 MKL1Q969V6 931 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 C12orf42Q96LP6 360 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 MTMR4Q9NYA4 1195 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 HOXC10Q9NYD6 342 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
TMEM260-206ENST00000555046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM260-206ENST00000555046 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
TMEM260-206ENST00000555046 FKTNO75072 461 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 EEF2P13639 858 aaKnown RBP12.5□□□□□ -0.41
TMEM260-206ENST00000555046 HAND2P61296 217 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 EVX2Q03828 476 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 MOGSQ13724 837 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 RRP12Q5JTH9 1297 aaKnown RBP12.5□□□□□ -0.41
TMEM260-206ENST00000555046 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
TMEM260-206ENST00000555046 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 ANO2Q9NQ90 1003 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 STXBP5LQ9Y2K9 1186 aa12.5□□□□□ -0.41
TMEM260-206ENST00000555046 MYO5AQ9Y4I1 1855 aaKnown RBP12.49□□□□□ -0.41
TMEM260-206ENST00000555046 ZKSCAN1P17029 563 aaPredicted RBP12.49□□□□□ -0.41
TMEM260-206ENST00000555046 SP3Q02447 781 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 PTH1RQ03431 593 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 CRHR2Q13324 411 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 FAM47AQ5JRC9 791 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 ACER1Q8TDN7 264 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 ERO1AQ96HE7 468 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 VCPKMTQ9H867 229 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.49□□□□□ -0.41
TMEM260-206ENST00000555046 PIEZO1Q92508 2521 aa12.49□□□□□ -0.41
TMEM260-206ENST00000555046 IGKV6D-41A0A0C4DH26 115 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 GNRH1P01148 92 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 COG2Q14746 738 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 SART3Q15020 963 aaKnown RBP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 RALYLQ86SE5 291 aaKnown RBP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 SIAH1Q8IUQ4 282 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 ASCC2Q9H1I8 757 aaPredicted RBP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 R3HDMLQ9H3Y0 253 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 STX8Q9UNK0 236 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 TRIM17Q9Y577 477 aa12.48□□□□□ -0.41
TMEM260-206ENST00000555046 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
TMEM260-206ENST00000555046 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 ERICH2A1L162 156 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 F5H6K3 240 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
TMEM260-206ENST00000555046 RAD21O60216 631 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 VCAM1P19320 739 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 HOXD10P28358 340 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 KLRC3Q07444 240 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 KRT32Q14532 448 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 ZYXQ15942 572 aaKnown RBP12.47□□□□□ -0.41
TMEM260-206ENST00000555046 TREML2Q5T2D2 321 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 C17orf99Q6UX52 265 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 GMCL1P1Q8NEA9 526 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 IL25Q9H293 177 aa12.47□□□□□ -0.41
TMEM260-206ENST00000555046 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms