RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	NPR1	P16066	1061 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	PSAPL1	Q6NUJ1	521 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	OTOP1	Q7RTM1	612 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	KRT26	Q7Z3Y9	468 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	NIM1K	Q8IY84	436 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	PNISR	Q8TF01	805 aa	Known RBP	6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	WFDC12	Q8WWY7	111 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	DPF3	Q92784	378 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	PRO3102	Q9H379	93 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	PGAP2	Q9UHJ9	254 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	STXBP5L	Q9Y2K9	1186 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	PCDHGA11	Q9Y5H2	935 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	USP16	Q9Y5T5	823 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	KDM3B	Q7LBC6	1761 aa		6.02	□□□□□ -1.45
ATXN3-231	ENST00000554994	TTC28	Q96AY4	2481 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	PRAMEF22	A3QJZ6	481 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	ELL2	O00472	640 aa	Predicted RBP	6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	TCERG1	O14776	1098 aa	Known RBP	6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	SNRPA1	P09661	255 aa	Known RBP	6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	MYL6B	P14649	208 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	AFF1	P51825	1210 aa	Known RBP	6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	SEMA3F	Q13275	785 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	BCL2L13	Q9BXK5	485 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	HCN4	Q9Y3Q4	1203 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	CACNA1A	O00555	2505 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	SCN7A	Q01118	1682 aa		6.01	□□□□□ -1.45
ATXN3-231	ENST00000554994	SNED1	Q8TER0	1413 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994		A0A087WZG4	1122 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	WTIP	A6NIX2	430 aa	Predicted RBP	6	□□□□□ -1.45
ATXN3-231	ENST00000554994	FAM177B	A6PVY3	158 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	PPIP5K2	O43314	1243 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	RGS9	O75916	674 aa	Predicted RBP	6	□□□□□ -1.45
ATXN3-231	ENST00000554994	IRAK1	P51617	712 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	GTF2I	P78347	998 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	CXCL9	Q07325	125 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	AIMP1	Q12904	312 aa	Known RBP	6	□□□□□ -1.45
ATXN3-231	ENST00000554994	AOC3	Q16853	763 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	SLC4A8	Q2Y0W8	1093 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	EML3	Q32P44	896 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	MOB2	Q70IA6	237 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	ZNF280C	Q8ND82	737 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	ARMC5	Q96C12	935 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	SNX27	Q96L92	541 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	SETDB2	Q96T68	719 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	PSMD1	Q99460	953 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	HEG1	Q9ULI3	1381 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	SPTBN5	Q9NRC6	3674 aa	Known RBP	6	□□□□□ -1.45
ATXN3-231	ENST00000554994	VCAN	P13611	3396 aa		6	□□□□□ -1.45
ATXN3-231	ENST00000554994	TMEM265	A0A087WTH1	108 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	PIK3CD	O00329	1044 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	RAD17	O75943	681 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	EGFR	P00533	1210 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	NOS3	P29474	1203 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	ABL2	P42684	1182 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	EIF4A1	P60842	406 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	GNAI1	P63096	354 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	CALD1	Q05682	793 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	NBPF5P	Q86XG9	351 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	MEGF10	Q96KG7	1140 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	MTMR10	Q9NXD2	777 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	DNAJB12	Q9NXW2	375 aa	Known RBP	5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	ANKIB1	Q9P2G1	1089 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	NOD1	Q9Y239	953 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	PTPN22	Q9Y2R2	807 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	GPC6	Q9Y625	555 aa	Predicted RBP	5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	LAMA3	Q16787	3333 aa		5.99	□□□□□ -1.45
ATXN3-231	ENST00000554994	MRC1	P22897	1456 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	CENPF	P49454	3210 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	CEMIP	Q8WUJ3	1361 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	ANXA1	P04083	346 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	TYRO3	Q06418	890 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	KRT24	Q2M2I5	525 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	LCE1D	Q5T752	114 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	PRR23C	Q6ZRP0	262 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	CD99L2	Q8TCZ2	262 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	ZNF428	Q96B54	188 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	CDCA5	Q96FF9	252 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	ZNF333	Q96JL9	665 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	PNMA5	Q96PV4	448 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	PHACTR1	Q9C0D0	580 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	STAP2	Q9UGK3	403 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	CNOT7	Q9UIV1	285 aa	Known RBP	5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	NAGPA	Q9UK23	515 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	CHMP3	Q9Y3E7	222 aa		5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	ASTN2	O75129	1339 aa	Predicted RBP	5.98	□□□□□ -1.45
ATXN3-231	ENST00000554994	TAF1	P21675	1872 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	SKI	P12755	728 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	TAL1	P17542	331 aa	Predicted RBP	5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	FST	P19883	344 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	EIF5	P55010	431 aa	Known RBP	5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	CAP1	Q01518	475 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	NOM1	Q5C9Z4	860 aa	Known RBP	5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	DUSP27	Q5VZP5	1158 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	KIF6	Q6ZMV9	814 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	TSR2	Q969E8	191 aa	Known RBP	5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	SUSD3	Q96L08	255 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	ZNRF3	Q9ULT6	936 aa		5.97	□□□□□ -1.45
ATXN3-231	ENST00000554994	ZNF609	O15014	1411 aa		5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms