RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 SYT1P21579 422 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 ADORA1P30542 326 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 TRIM32Q13049 653 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 GADL1Q6ZQY3 521 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 RUFY3Q7L099 469 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 SMCR8Q8TEV9 937 aaPredicted RBP12.99□□□□□ -0.33
SRP54-205ENST00000554803 PIBF1Q8WXW3 757 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 MYLIPQ8WY64 445 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
SRP54-205ENST00000554803 DBNLQ9UJU6 430 aaKnown RBP12.99□□□□□ -0.33
SRP54-205ENST00000554803 MYH7P12883 1935 aa12.99□□□□□ -0.33
SRP54-205ENST00000554803 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 PDE8BO95263 885 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 FGFR2P21802 821 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 KRT85P78386 507 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 FAM110CQ1W6H9 321 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 LRRC26Q2I0M4 334 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 ANKRD13CQ8N6S4 541 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.98□□□□□ -0.33
SRP54-205ENST00000554803 RLFQ13129 1914 aa12.98□□□□□ -0.33
SRP54-205ENST00000554803 MAST3O60307 1309 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 CASTP20810 708 aaKnown RBP12.97□□□□□ -0.33
SRP54-205ENST00000554803 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 ATL3Q6DD88 541 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 NEUROD6Q96NK8 337 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 DDX19AQ9NUU7 478 aaKnown RBP12.97□□□□□ -0.33
SRP54-205ENST00000554803 GJD2Q9UKL4 321 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 AFG3L2Q9Y4W6 797 aa12.97□□□□□ -0.33
SRP54-205ENST00000554803 KDM4AO75164 1064 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 FOSL2P15408 326 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRP54-205ENST00000554803 CHAF1AQ13111 956 aaPredicted RBP12.96□□□□□ -0.33
SRP54-205ENST00000554803 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.33
SRP54-205ENST00000554803 MAP3K21Q5TCX8 1036 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 SCYL3Q8IZE3 742 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 TRIB2Q92519 343 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 XAGE2Q96GT9 111 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 LBHD1Q9BQE6 289 aaPredicted RBP12.96□□□□□ -0.33
SRP54-205ENST00000554803 TTYH1Q9H313 450 aaPredicted RBP12.96□□□□□ -0.33
SRP54-205ENST00000554803 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
SRP54-205ENST00000554803 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
SRP54-205ENST00000554803 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.34
SRP54-205ENST00000554803 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
SRP54-205ENST00000554803 PTPRAP18433 802 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 DHX8Q14562 1220 aaKnown RBP12.95□□□□□ -0.34
SRP54-205ENST00000554803 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
SRP54-205ENST00000554803 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
SRP54-205ENST00000554803 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
SRP54-205ENST00000554803 PNMA3Q9UL41 463 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
SRP54-205ENST00000554803 ATRNL1Q5VV63 1379 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 MAP4K4O95819 1239 aaPredicted RBP12.94□□□□□ -0.34
SRP54-205ENST00000554803 SLC5A1P13866 664 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 GJB2P29033 226 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 MYRIPQ8NFW9 859 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 LPIN2Q92539 896 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 LLPHQ9BRT6 129 aaKnown RBP12.94□□□□□ -0.34
SRP54-205ENST00000554803 FUCA2Q9BTY2 467 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 ZSCAN16Q9H4T2 348 aaPredicted RBP12.94□□□□□ -0.34
SRP54-205ENST00000554803 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
SRP54-205ENST00000554803 R3HCC1Q9Y3T6 440 aaKnown RBP12.94□□□□□ -0.34
SRP54-205ENST00000554803 UQCRHLA0A096LP55 91 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 UQCRHP07919 91 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
SRP54-205ENST00000554803 SMAD3P84022 425 aaKnown RBP12.93□□□□□ -0.34
SRP54-205ENST00000554803 TCP10Q12799 353 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 CREB3L3Q68CJ9 461 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 LHX8Q68G74 356 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 FAM200AQ8TCP9 573 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 RBM8AQ9Y5S9 174 aaKnown RBP12.93□□□□□ -0.34
SRP54-205ENST00000554803 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.93□□□□□ -0.34
SRP54-205ENST00000554803 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
SRP54-205ENST00000554803 CTAGE5O15320 804 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
SRP54-205ENST00000554803 PHKA1P46020 1223 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
SRP54-205ENST00000554803 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 NFIAQ12857 509 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 SHHQ15465 462 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms