RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
CNIH1-204ENST00000554683 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
CNIH1-204ENST00000554683 AKNAD1Q5T1N1 836 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 CASC1Q6TDU7 716 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 CEP95Q96GE4 821 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 R3HDMLQ9H3Y0 253 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 KANSL2Q9H9L4 492 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
CNIH1-204ENST00000554683 COL11A1P12107 1806 aaPredicted RBP12.69□□□□□ -0.38
CNIH1-204ENST00000554683 ZNF213O14771 459 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 TBC1D8O95759 1140 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 VCAM1P19320 739 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 USP14P54578 494 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 TAF1CQ15572 869 aaPredicted RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 ZYXQ15942 572 aaKnown RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 NOM1Q5C9Z4 860 aaKnown RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 FAM47AQ5JRC9 791 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 ZNF444Q8N0Y2 327 aaPredicted RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 MAP4K1Q92918 833 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
CNIH1-204ENST00000554683 RBM8AQ9Y5S9 174 aaKnown RBP12.68□□□□□ -0.38
CNIH1-204ENST00000554683 CENPFP49454 3210 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 CYP21A2P08686 494 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
CNIH1-204ENST00000554683 LBX1P52954 281 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 TFAP4Q01664 338 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 ANO2Q9NQ90 1003 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 MTMR4Q9NYA4 1195 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 TAF6LQ9Y6J9 622 aa12.67□□□□□ -0.38
CNIH1-204ENST00000554683 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
CNIH1-204ENST00000554683 NMT2O60551 498 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 CYP2C8P10632 490 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
CNIH1-204ENST00000554683 NOVP48745 357 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 NT5C2P49902 561 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
CNIH1-204ENST00000554683 KIAA1211Q6ZU35 1233 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 LPAR1Q92633 364 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 ZFYVE28Q9HCC9 887 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 NYAP2Q9P242 653 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 SYNPO2Q9UMS6 1093 aa12.66□□□□□ -0.38
CNIH1-204ENST00000554683 GPR25O00155 361 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 TLR2O60603 784 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 TTLL1O95922 423 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.381e-59■■■■■ 32.8
CNIH1-204ENST00000554683 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
CNIH1-204ENST00000554683 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
CNIH1-204ENST00000554683 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 PNMA3Q9UL41 463 aa12.65□□□□□ -0.38
CNIH1-204ENST00000554683 B4E1Z4 1266 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 WDR46O15213 610 aaKnown RBP12.64□□□□□ -0.39
CNIH1-204ENST00000554683 BCRP11274 1271 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 ZNF296Q8WUU4 475 aaPredicted RBP12.64□□□□□ -0.39
CNIH1-204ENST00000554683 ESR2Q92731 530 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 MKL1Q969V6 931 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 RPAP3Q9H6T3 665 aaPredicted RBP12.64□□□□□ -0.39
CNIH1-204ENST00000554683 CNNM2Q9H8M5 875 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
CNIH1-204ENST00000554683 PLXNB2O15031 1838 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 DOCK3Q8IZD9 2030 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 SLC27A2O14975 620 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 KDM4AO75164 1064 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 NDUFB10O96000 172 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
CNIH1-204ENST00000554683 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
CNIH1-204ENST00000554683 CREB3L3Q68CJ9 461 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 C17orf99Q6UX52 265 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 SPICE1Q8N0Z3 855 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 GMCL1P1Q8NEA9 526 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
CNIH1-204ENST00000554683 KRT23Q9C075 422 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 CPA4Q9UI42 421 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L15C9J2P7 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L13C9JLJ4 530 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms