RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 CCNJLQ8IV13 435 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 WDR63Q8IWG1 891 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 DTWD1Q8N5C7 304 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-212ENST00000554486 RTF1Q92541 710 aaKnown RBP8.17□□□□□ -1.1
SCFD1-212ENST00000554486 BHLHE41Q9C0J9 482 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-212ENST00000554486 KIAA1522Q9P206 1035 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-212ENST00000554486 TRIM33Q9UPN9 1127 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 ITGB4P16144 1822 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 RGS12O14924 1447 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 HSP90AB1P08238 724 aaKnown RBP8.16□□□□□ -1.1
SCFD1-212ENST00000554486 ZNF853P0CG23 659 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 MRC1P22897 1456 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 GNA15P30679 374 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 GRIA4P48058 902 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 IL16Q14005 1332 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 GRIK4Q16099 956 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 LDLRAD1Q5T700 205 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 NXPE4Q6UWF7 544 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 TMC4Q7Z404 712 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 CACTIN-AS1Q8N1I8 211 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 BCO2Q9BYV7 579 aa8.16□□□□□ -1.1
SCFD1-212ENST00000554486 DOT1LQ8TEK3 1739 aa8.15□□□□□ -1.1
SCFD1-212ENST00000554486 PDE2AO00408 941 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-212ENST00000554486 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-212ENST00000554486 SLFN5Q08AF3 891 aa8.15□□□□□ -1.1
SCFD1-212ENST00000554486 MRPL58Q14197 206 aaKnown RBP8.15□□□□□ -1.1
SCFD1-212ENST00000554486 CEP135Q66GS9 1140 aa8.15□□□□□ -1.1
SCFD1-212ENST00000554486 TRMT2AQ8IZ69 625 aaKnown RBP8.15□□□□□ -1.1
SCFD1-212ENST00000554486 LIN7BQ9HAP6 207 aa8.15□□□□□ -1.1
SCFD1-212ENST00000554486 ABCB6Q9NP58 842 aa8.15□□□□□ -1.1
SCFD1-212ENST00000554486 SBF2Q86WG5 1849 aa8.15□□□□□ -1.11
SCFD1-212ENST00000554486 ERVV-2B6SEH9 535 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 E9PSI1 815 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 CHL1O00533 1208 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-212ENST00000554486 CALD1Q05682 793 aaKnown RBP8.14□□□□□ -1.11
SCFD1-212ENST00000554486 SPRED3Q2MJR0 410 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 DUSP27Q5VZP5 1158 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
SCFD1-212ENST00000554486 C3orf58Q8NDZ4 430 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 EHD4Q9H223 541 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 SLC52A2Q9HAB3 445 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 AK5Q9Y6K8 562 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 KDM3BQ7LBC6 1761 aa8.14□□□□□ -1.11
SCFD1-212ENST00000554486 BCL9O00512 1426 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 CTSHP09668 335 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 GNAI1P63096 354 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 TEFQ10587 303 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 SUZ12Q15022 739 aaKnown RBP8.13□□□□□ -1.11
SCFD1-212ENST00000554486 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-212ENST00000554486 KRT27Q7Z3Y8 459 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 FMR1NBQ8N0W7 255 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-212ENST00000554486 TSR2Q969E8 191 aaKnown RBP8.13□□□□□ -1.11
SCFD1-212ENST00000554486 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
SCFD1-212ENST00000554486 ADAM19Q9H013 955 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 C12orf49Q9H741 205 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
SCFD1-212ENST00000554486 EP400Q96L91 3159 aa8.13□□□□□ -1.11
SCFD1-212ENST00000554486 FANCIQ9NVI1 1328 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 PAPPAQ13219 1627 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 KCNQ3O43525 872 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 CABP4P57796 275 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 GDF6Q6KF10 455 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-212ENST00000554486 PTF1AQ7RTS3 328 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 PIGBQ92521 554 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 ACSBG1Q96GR2 724 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 MUC3BQ9H195 1237 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 BABAM1Q9NWV8 329 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 TSPYL4Q9UJ04 414 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
SCFD1-212ENST00000554486 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 BTBD11A6QL63 1104 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 TM4SF5O14894 197 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 KCNQ2O43526 872 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 SMNDC1O75940 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCFD1-212ENST00000554486 ITPKAP23677 461 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 FGD1P98174 961 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 SLC39A6Q13433 755 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 VN1R5Q7Z5H4 357 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 IL22RA1Q8N6P7 574 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 LACRTQ9GZZ8 138 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 SH2B1Q9NRF2 756 aaPredicted RBP8.11□□□□□ -1.11
SCFD1-212ENST00000554486 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 UBR2Q8IWV8 1755 aa8.11□□□□□ -1.11
SCFD1-212ENST00000554486 BTAF1O14981 1849 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 A0A096LPE4 126 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 A0A1W2PPZ6 126 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
SCFD1-212ENST00000554486 GIPC1O14908 333 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 ADAM23O75077 832 aa8.1□□□□□ -1.11
SCFD1-212ENST00000554486 EPHA1P21709 976 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms