RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 C12orf60Q5U649 245 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 LPAR1Q92633 364 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 C11orf49Q9H6J7 331 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 ECHDC1Q9NTX5 307 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 SLC4A4Q9Y6R1 1079 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 MFSD14CQ5VZR4 134 aa22.57■■□□□ 1.2
CPSF2-203ENST00000554290 GPATCH3Q96I76 525 aa22.57■■□□□ 1.2
CPSF2-203ENST00000554290 AKR1B1P15121 316 aa22.56■■□□□ 1.2
CPSF2-203ENST00000554290 CDK8P49336 464 aa22.56■■□□□ 1.2
CPSF2-203ENST00000554290 ICA1Q05084 483 aa22.56■■□□□ 1.2
CPSF2-203ENST00000554290 MNX1P50219 401 aaPredicted RBP22.55■■□□□ 1.2
CPSF2-203ENST00000554290 ATP2B2Q01814 1243 aa22.55■■□□□ 1.2
CPSF2-203ENST00000554290 C16orf86Q6ZW13 317 aa22.55■■□□□ 1.2
CPSF2-203ENST00000554290 MB21D1Q8N884 522 aa22.55■■□□□ 1.2
CPSF2-203ENST00000554290 PUS7LQ9H0K6 701 aaKnown RBP22.55■■□□□ 1.2
CPSF2-203ENST00000554290 PRO3102Q9H379 93 aa22.55■■□□□ 1.2
CPSF2-203ENST00000554290 DCTPP1Q9H773 170 aa22.55■■□□□ 1.2
CPSF2-203ENST00000554290 TMX2Q9Y320 296 aa22.55■■□□□ 1.2
CPSF2-203ENST00000554290 CYP2D7A0A087X1C5 515 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 STRNO43815 780 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 CHGBP05060 677 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 HOXC6P09630 235 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 CCND3P30281 292 aaPredicted RBP22.54■■□□□ 1.2
CPSF2-203ENST00000554290 GRB14Q14449 540 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 CTR9Q6PD62 1173 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 VCPKMTQ9H867 229 aa22.54■■□□□ 1.2
CPSF2-203ENST00000554290 A0A1W2PPC1 479 aa22.53■■□□□ 1.2
CPSF2-203ENST00000554290 LHX8Q68G74 356 aa22.53■■□□□ 1.2
CPSF2-203ENST00000554290 SIAH1Q8IUQ4 282 aa22.53■■□□□ 1.2
CPSF2-203ENST00000554290 C7orf61Q8IZ16 206 aa22.53■■□□□ 1.2
CPSF2-203ENST00000554290 MOV10L1Q9BXT6 1211 aaKnown RBP22.53■■□□□ 1.2
CPSF2-203ENST00000554290 SPATC1LQ9H0A9 340 aa22.53■■□□□ 1.2
CPSF2-203ENST00000554290 KANSL2Q9H9L4 492 aa22.53■■□□□ 1.2
CPSF2-203ENST00000554290 FLOT1O75955 427 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 DSG3P32926 999 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 KIAA1755Q5JYT7 1200 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 DPP9Q86TI2 863 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 CLEC10AQ8IUN9 316 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 SPICE1Q8N0Z3 855 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 KBTBD3Q8NAB2 608 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 SHCBP1Q8NEM2 672 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 FLRT1Q9NZU1 646 aa22.52■■□□□ 1.2
CPSF2-203ENST00000554290 ARPP21Q9UBL0 812 aaPredicted RBP22.52■■□□□ 1.2
CPSF2-203ENST00000554290 WDR46O15213 610 aaKnown RBP22.51■■□□□ 1.19
CPSF2-203ENST00000554290 STRBPQ96SI9 672 aaKnown RBP22.51■■□□□ 1.19
CPSF2-203ENST00000554290 MROH8Q9H579 483 aa22.51■■□□□ 1.19
CPSF2-203ENST00000554290 SLC5A4Q9NY91 659 aa22.51■■□□□ 1.19
CPSF2-203ENST00000554290 STAP2Q9UGK3 403 aa22.51■■□□□ 1.19
CPSF2-203ENST00000554290 SMIM22K7EJ46 135 aa22.5■■□□□ 1.19
CPSF2-203ENST00000554290 MSCO60682 206 aa22.5■■□□□ 1.19
CPSF2-203ENST00000554290 EEF2P13639 858 aaKnown RBP22.5■■□□□ 1.19
CPSF2-203ENST00000554290 PLS1Q14651 629 aa22.5■■□□□ 1.19
CPSF2-203ENST00000554290 GIMAP6Q6P9H5 292 aa22.5■■□□□ 1.19
CPSF2-203ENST00000554290 NPLOC4Q8TAT6 608 aa22.5■■□□□ 1.19
CPSF2-203ENST00000554290 TRIOBPQ9H2D6 2365 aa22.5■■□□□ 1.19
CPSF2-203ENST00000554290 ZFYP08048 801 aaPredicted RBP22.49■■□□□ 1.19
CPSF2-203ENST00000554290 ERCC3P19447 782 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 ADORA2AP29274 412 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 CNGA1P29973 690 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 SBK1Q52WX2 424 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 APPBP2Q92624 585 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 ATG4CQ96DT6 458 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 GOPCQ9HD26 462 aa22.49■■□□□ 1.19
CPSF2-203ENST00000554290 RNF113AO15541 343 aaKnown RBP22.48■■□□□ 1.19
CPSF2-203ENST00000554290 COL6A1P12109 1028 aa22.48■■□□□ 1.19
CPSF2-203ENST00000554290 CYP2C19P33261 490 aa22.48■■□□□ 1.19
CPSF2-203ENST00000554290 LRRFIP1Q32MZ4 808 aaKnown RBP22.48■■□□□ 1.19
CPSF2-203ENST00000554290 SAMD1Q6SPF0 538 aaPredicted RBP22.48■■□□□ 1.19
CPSF2-203ENST00000554290 ABRAQ8N0Z2 381 aa22.48■■□□□ 1.19
CPSF2-203ENST00000554290 DDX20Q9UHI6 824 aaKnown RBP22.48■■□□□ 1.19
CPSF2-203ENST00000554290 ZMYND8Q9ULU4 1186 aaPredicted RBP22.48■■□□□ 1.19
CPSF2-203ENST00000554290 PFASO15067 1338 aa22.48■■□□□ 1.19
CPSF2-203ENST00000554290 BAZ2AQ9UIF9 1905 aaKnown RBP22.47■■□□□ 1.19
CPSF2-203ENST00000554290 GSG1L2A8MUP6 293 aa22.47■■□□□ 1.19
CPSF2-203ENST00000554290 GNAT2P19087 354 aa22.47■■□□□ 1.19
CPSF2-203ENST00000554290 OLFML2BQ68BL8 750 aa22.47■■□□□ 1.19
CPSF2-203ENST00000554290 NCAPG2Q86XI2 1143 aa22.47■■□□□ 1.19
CPSF2-203ENST00000554290 OSBP2Q969R2 916 aa22.47■■□□□ 1.19
CPSF2-203ENST00000554290 MKNK2Q9HBH9 465 aa22.47■■□□□ 1.19
CPSF2-203ENST00000554290 SLC25A27O95847 323 aa22.46■■□□□ 1.19
CPSF2-203ENST00000554290 BMP8BP34820 402 aa22.46■■□□□ 1.19
CPSF2-203ENST00000554290 TSHZ3Q63HK5 1081 aa22.46■■□□□ 1.19
CPSF2-203ENST00000554290 GDF15Q99988 308 aa22.46■■□□□ 1.19
CPSF2-203ENST00000554290 MYH7P12883 1935 aa22.45■■□□□ 1.18
CPSF2-203ENST00000554290 MINDY4BA8MYZ0 360 aa22.45■■□□□ 1.18
CPSF2-203ENST00000554290 RAD21O60216 631 aa22.45■■□□□ 1.18
CPSF2-203ENST00000554290 FCER1AP12319 257 aa22.45■■□□□ 1.18
CPSF2-203ENST00000554290 ZNF287Q9HBT7 754 aa22.45■■□□□ 1.18
CPSF2-203ENST00000554290 MYH8P13535 1937 aa22.45■■□□□ 1.18
CPSF2-203ENST00000554290 ERC2O15083 957 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 IGHA2P01877 340 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 APPP05067 770 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 CYBAP13498 195 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 SYN1P17600 705 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 TTC41PQ6P2S7 1318 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 ADAMTS5Q9UNA0 930 aa22.44■■□□□ 1.18
CPSF2-203ENST00000554290 ALPK3Q96L96 1907 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 GPAA1O43292 621 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 COBLO75128 1261 aa22.43■■□□□ 1.18
CPSF2-203ENST00000554290 RASA1P20936 1047 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms