RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 F8W031 263 aaPredicted RBP12.92□□□□□ -0.34
PTPN21-205ENST00000554270 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
PTPN21-205ENST00000554270 EIF6P56537 245 aaKnown RBP12.92□□□□□ -0.34
PTPN21-205ENST00000554270 CENPHQ9H3R5 247 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 ZNF652Q9Y2D9 606 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 ZPR1O75312 459 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 FHOD1Q9Y613 1164 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 PHLPP2Q6ZVD8 1323 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TRIM49BA6NDI0 452 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 WNT7AO00755 349 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
PTPN21-205ENST00000554270 PLCD1P51178 756 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 NELFBQ8WX92 580 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 RNASE9P60153 205 aaKnown RBP12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TFAP4Q01664 338 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
PTPN21-205ENST00000554270 CC2D1AQ6P1N0 951 aaPredicted RBP12.91□□□□□ -0.34
PTPN21-205ENST00000554270 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 SGMS1Q86VZ5 419 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
PTPN21-205ENST00000554270 VGLL2Q8N8G2 317 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 TRIM65Q6PJ69 517 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 SLC44A5Q8NCS7 719 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
PTPN21-205ENST00000554270 ARID5AQ03989 594 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 STIM1Q13586 685 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
PTPN21-205ENST00000554270 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 PAGE5Q96GU1 130 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 BPIFA3Q9BQP9 254 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 CRNKL1Q9BZJ0 848 aaKnown RBP12.9□□□□□ -0.34
PTPN21-205ENST00000554270 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
PTPN21-205ENST00000554270 CCDC148Q8NFR7 591 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 ENOX1Q8TC92 643 aaKnown RBP12.9□□□□□ -0.34
PTPN21-205ENST00000554270 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 L2HGDHQ9H9P8 463 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 CWC15Q9P013 229 aaKnown RBP12.9□□□□□ -0.34
PTPN21-205ENST00000554270 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
PTPN21-205ENST00000554270 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.35
PTPN21-205ENST00000554270 FXR1P51114 621 aaKnown RBP eCLIP12.9□□□□□ -0.35
PTPN21-205ENST00000554270 CUL4BQ13620 913 aa12.9□□□□□ -0.35
PTPN21-205ENST00000554270 SPATA1Q5VX52 437 aa12.9□□□□□ -0.35
PTPN21-205ENST00000554270 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.35
PTPN21-205ENST00000554270 CCDC47Q96A33 483 aaKnown RBP12.9□□□□□ -0.35
PTPN21-205ENST00000554270 CRACR2AQ9BSW2 395 aa12.9□□□□□ -0.35
PTPN21-205ENST00000554270 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.35
PTPN21-205ENST00000554270 HDAC6Q9UBN7 1215 aa12.9□□□□□ -0.35
PTPN21-205ENST00000554270 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 A0A087X0B3 334 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 ITPK1Q13572 414 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 INF2Q27J81 1249 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 LETM2Q2VYF4 491 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 NAPGQ99747 312 aaPredicted RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 USP17L3A6NCW0 530 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 USP17L4A6NCW7 530 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 ASIC1P78348 528 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 PAK1Q13153 545 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 PTPROQ16827 1216 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 USP17L1Q7RTZ2 530 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CDHR2Q9BYE9 1310 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 ABL1P00519 1130 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 H2AFXP16104 143 aaPredicted RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 HIBADHP31937 336 aaKnown RBP12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CCDC96Q2M329 555 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CEP112Q8N8E3 955 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 SETDB2Q96T68 719 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 ABCB6Q9NP58 842 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
PTPN21-205ENST00000554270 SLIT3O75094 1523 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms