RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 ACRP10323 421 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 RARBP10826 455 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 CSF2RAP15509 400 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 JAG1P78504 1218 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L24Q0WX57 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 TBX21Q9UL17 535 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 GTPBP6O43824 516 aaPredicted RBP20.82■□□□□ 0.92
NEK9-204ENST00000554258 PGK1P00558 417 aa20.82■□□□□ 0.92
NEK9-204ENST00000554258 PHKA1P46020 1223 aa20.82■□□□□ 0.92
NEK9-204ENST00000554258 PPP2R2DQ66LE6 453 aa20.82■□□□□ 0.92
NEK9-204ENST00000554258 SPTY2D1Q68D10 685 aaPredicted RBP20.82■□□□□ 0.92
NEK9-204ENST00000554258 TMEM199Q8N511 208 aa20.82■□□□□ 0.92
NEK9-204ENST00000554258 MTIF3Q9H2K0 278 aaKnown RBP20.82■□□□□ 0.92
NEK9-204ENST00000554258 BTBD7Q9P203 1132 aa20.82■□□□□ 0.92
NEK9-204ENST00000554258 EYA2O00167 538 aa20.81■□□□□ 0.92
NEK9-204ENST00000554258 ATP2B3Q16720 1220 aa20.81■□□□□ 0.92
NEK9-204ENST00000554258 PI4KBQ9UBF8 816 aa20.81■□□□□ 0.92
NEK9-204ENST00000554258 USP34Q70CQ2 3546 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 STRNO43815 780 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 GDF11O95390 407 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 ZYXQ15942 572 aaKnown RBP20.8■□□□□ 0.92
NEK9-204ENST00000554258 SHROOM1Q2M3G4 852 aaPredicted RBP20.8■□□□□ 0.92
NEK9-204ENST00000554258 FBXL18Q96ME1 805 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 STARD7Q9NQZ5 370 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 SLC5A4Q9NY91 659 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 ZBTB21Q9ULJ3 1066 aa20.8■□□□□ 0.92
NEK9-204ENST00000554258 MAP4K4O95819 1239 aaPredicted RBP20.79■□□□□ 0.92
NEK9-204ENST00000554258 MECOMQ03112 1051 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 CSPP1Q1MSJ5 1256 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 HLA-CQ95604 372 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 FEZ1Q99689 392 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 TRIM34Q9BYJ4 488 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 CD320Q9NPF0 282 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 MTCH2Q9Y6C9 303 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 CDK5RAP2Q96SN8 1893 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 SPTBN4Q9H254 2564 aa20.79■□□□□ 0.92
NEK9-204ENST00000554258 ZNFX1Q9P2E3 1918 aaKnown RBP20.78■□□□□ 0.92
NEK9-204ENST00000554258 LBX2Q6XYB7 198 aa20.78■□□□□ 0.92
NEK9-204ENST00000554258 CATSPERGQ6ZRH7 1159 aa20.78■□□□□ 0.92
NEK9-204ENST00000554258 NUP133Q8WUM0 1156 aa20.78■□□□□ 0.92
NEK9-204ENST00000554258 KCNH6Q9H252 994 aa20.78■□□□□ 0.92
NEK9-204ENST00000554258 COBLO75128 1261 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 RABGGTBP53611 331 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 ALDH1L2Q3SY69 923 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 TEX11Q8IYF3 940 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 C12orf42Q96LP6 360 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 PPP1R12CQ9BZL4 782 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 ZNF318Q5VUA4 2279 aa20.77■□□□□ 0.92
NEK9-204ENST00000554258 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.91
NEK9-204ENST00000554258 POU3F3P20264 500 aaPredicted RBP20.76■□□□□ 0.91
NEK9-204ENST00000554258 ACLYP53396 1101 aa20.76■□□□□ 0.91
NEK9-204ENST00000554258 RASGRF1Q13972 1273 aa20.76■□□□□ 0.91
NEK9-204ENST00000554258 CRACR2BQ8N4Y2 399 aaPredicted RBP20.76■□□□□ 0.91
NEK9-204ENST00000554258 DHX36Q9H2U1 1008 aaKnown RBP20.76■□□□□ 0.91
NEK9-204ENST00000554258 DNAJC18Q9H819 358 aa20.76■□□□□ 0.91
NEK9-204ENST00000554258 IL23AQ9NPF7 189 aa20.76■□□□□ 0.91
NEK9-204ENST00000554258 SPDYE16A6NNV3 312 aaPredicted RBP20.75■□□□□ 0.91
NEK9-204ENST00000554258 RFXAPO00287 272 aa20.75■□□□□ 0.91
NEK9-204ENST00000554258 FGBP02675 491 aa20.75■□□□□ 0.91
NEK9-204ENST00000554258 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
NEK9-204ENST00000554258 CCDC102BQ68D86 513 aa20.75■□□□□ 0.91
NEK9-204ENST00000554258 TSEN34Q9BSV6 310 aaKnown RBP20.75■□□□□ 0.91
NEK9-204ENST00000554258 MOV10L1Q9BXT6 1211 aaKnown RBP20.75■□□□□ 0.91
NEK9-204ENST00000554258 A0A0G2JMZ2 1700 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 LDHCP07864 332 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 MYOGP15173 224 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 GSTO1P78417 241 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 ZNF384Q8TF68 577 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 SSH1Q8WYL5 1049 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 MAML3Q96JK9 1138 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 CEP126Q9P2H0 1117 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 NRBP1Q9UHY1 535 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 PCDHA11Q9Y5I1 949 aa20.74■□□□□ 0.91
NEK9-204ENST00000554258 PDS5AQ29RF7 1337 aaKnown RBP20.74■□□□□ 0.91
NEK9-204ENST00000554258 VCAM1P19320 739 aa20.73■□□□□ 0.91
NEK9-204ENST00000554258 OTOP2Q7RTS6 562 aa20.73■□□□□ 0.91
NEK9-204ENST00000554258 FOXP4Q8IVH2 680 aaPredicted RBP20.73■□□□□ 0.91
NEK9-204ENST00000554258 MRPL50Q8N5N7 158 aaKnown RBP20.73■□□□□ 0.91
NEK9-204ENST00000554258 ZBTB22O15209 634 aa20.72■□□□□ 0.91
NEK9-204ENST00000554258 ALADP13716 330 aa20.72■□□□□ 0.91
NEK9-204ENST00000554258 ERCC3P19447 782 aa20.72■□□□□ 0.91
NEK9-204ENST00000554258 USP14P54578 494 aa20.72■□□□□ 0.91
NEK9-204ENST00000554258 FOXK2Q01167 660 aa20.72■□□□□ 0.91
NEK9-204ENST00000554258 KRT40Q6A162 431 aa20.72■□□□□ 0.91
NEK9-204ENST00000554258 LENG1Q96BZ8 264 aaPredicted RBP20.72■□□□□ 0.91
NEK9-204ENST00000554258 MOXD2PA6NHM9 499 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 ST18O60284 1047 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 ADAMTS4O75173 837 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 GH2P01242 217 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 ADORA1P30542 326 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 CYP2C18P33260 490 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 RFX5P48382 616 aaPredicted RBP20.71■□□□□ 0.91
NEK9-204ENST00000554258 GJD3Q8N144 294 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 SHCBP1Q8NEM2 672 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 SH3RF3Q8TEJ3 882 aaPredicted RBP20.71■□□□□ 0.91
NEK9-204ENST00000554258 SIL1Q9H173 461 aa20.71■□□□□ 0.91
NEK9-204ENST00000554258 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms