RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 TMPRSS7Q7RTY8 843 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 CREG2Q8IUH2 290 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 VWCEQ96DN2 955 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 ASPNQ9BXN1 380 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 GPR62Q9BZJ7 368 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-225ENST00000554214 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
ATXN3-225ENST00000554214 ESR1P03372 595 aa7.9□□□□□ -1.14
ATXN3-225ENST00000554214 SRFP11831 508 aa7.9□□□□□ -1.14
ATXN3-225ENST00000554214 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.14
ATXN3-225ENST00000554214 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
ATXN3-225ENST00000554214 NLRC3Q7RTR2 1065 aa7.9□□□□□ -1.14
ATXN3-225ENST00000554214 NT5DC4Q86YG4 428 aa7.9□□□□□ -1.14
ATXN3-225ENST00000554214 TMEM40Q8WWA1 233 aa7.9□□□□□ -1.14
ATXN3-225ENST00000554214 PAPLNO95428 1278 aa7.89□□□□□ -1.15
ATXN3-225ENST00000554214 NME1P15531 152 aaKnown RBP7.89□□□□□ -1.15
ATXN3-225ENST00000554214 TSPYL5Q86VY4 417 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-225ENST00000554214 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-225ENST00000554214 BICRAQ9NZM4 1560 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 RAD51AP2Q09MP3 1159 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 PAK2Q13177 524 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 GAB4Q2WGN9 574 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-225ENST00000554214 FBXW10Q5XX13 1052 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 FERD3LQ96RJ6 166 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 CTNND2Q9UQB3 1225 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 NACADO15069 1562 aa7.88□□□□□ -1.15
ATXN3-225ENST00000554214 MEIS3P2A8K0S8 358 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 IMPDH2P12268 514 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 CCNFP41002 786 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 RNF4P78317 190 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 CLEC16AQ2KHT3 1053 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 FMNL2Q96PY5 1086 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 SLC9A7Q96T83 725 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 ASCC2Q9H1I8 757 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-225ENST00000554214 SLAMF8Q9P0V8 285 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 DUSP13Q9UII6 198 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
ATXN3-225ENST00000554214 CLEC3AO75596 197 aa7.86□□□□□ -1.15
ATXN3-225ENST00000554214 TXKP42681 527 aa7.86□□□□□ -1.15
ATXN3-225ENST00000554214 AFMP43652 599 aa7.86□□□□□ -1.15
ATXN3-225ENST00000554214 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
ATXN3-225ENST00000554214 FLAD1Q8NFF5 587 aa7.86□□□□□ -1.15
ATXN3-225ENST00000554214 PPT2Q9UMR5 302 aa7.86□□□□□ -1.15
ATXN3-225ENST00000554214 CARMIL2Q6F5E8 1435 aa7.86□□□□□ -1.15
ATXN3-225ENST00000554214 SHISA3A0PJX4 238 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 TNFRSF10CO14798 259 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 GDNFP39905 211 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 EGR3Q06889 387 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 NBPF9Q3BBW0 867 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 TTC6Q86TZ1 520 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 TMEM192Q8IY95 271 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 CCDC120Q96HB5 630 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 ADAMTS10Q9H324 1103 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 GINM1Q9NU53 330 aa7.85□□□□□ -1.15
ATXN3-225ENST00000554214 DNAJC25-GNG10A0A024R161 153 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 FAM86C2PA6NEL3 165 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 LTKP29376 864 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 NMIQ13287 307 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-225ENST00000554214 RALGPS1Q5JS13 557 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
ATXN3-225ENST00000554214 FAM168AQ92567 244 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 ZNF512BQ96KM6 892 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-225ENST00000554214 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 PCDHA11Q9Y5I1 949 aa7.84□□□□□ -1.15
ATXN3-225ENST00000554214 ACRP10323 421 aa7.83□□□□□ -1.16
ATXN3-225ENST00000554214 COL9A2Q14055 689 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-225ENST00000554214 FYB2Q5VWT5 728 aa7.83□□□□□ -1.16
ATXN3-225ENST00000554214 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
ATXN3-225ENST00000554214 DHRS1Q96LJ7 313 aa7.83□□□□□ -1.16
ATXN3-225ENST00000554214 SPATA32Q96LK8 384 aa7.83□□□□□ -1.16
ATXN3-225ENST00000554214 CRBNQ96SW2 442 aa7.83□□□□□ -1.16
ATXN3-225ENST00000554214 HK2P52789 917 aa7.82□□□□□ -1.16
ATXN3-225ENST00000554214 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
ATXN3-225ENST00000554214 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
ATXN3-225ENST00000554214 RBBP8NLQ8NC74 664 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-225ENST00000554214 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
ATXN3-225ENST00000554214 TM9SF2Q99805 663 aa7.82□□□□□ -1.16
ATXN3-225ENST00000554214 SNW1Q13573 536 aaKnown RBP7.81□□□□□ -1.16
ATXN3-225ENST00000554214 KCNMB1Q16558 191 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 CCDC81Q6ZN84 652 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 ZSWIM9Q86XI8 627 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 USHBP1Q8N6Y0 703 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 DAGLBQ8NCG7 672 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 RASGRP4Q8TDF6 673 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 SYTL5Q8TDW5 730 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-225ENST00000554214 SYTL4Q96C24 671 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-225ENST00000554214 KIRREL1Q96J84 757 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 TGIF2Q9GZN2 237 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 PRDM14Q9GZV8 571 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 MKRN2Q9H000 416 aaKnown RBP7.81□□□□□ -1.16
ATXN3-225ENST00000554214 ACBD3Q9H3P7 528 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 FBXL21Q9UKT6 434 aa7.81□□□□□ -1.16
ATXN3-225ENST00000554214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-225ENST00000554214 SOX9P48436 509 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms