RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 KIAA1755Q5JYT7 1200 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 CATSPERGQ6ZRH7 1159 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 SPICE1Q8N0Z3 855 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 CEP95Q96GE4 821 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 NYAP2Q9P242 653 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 CLIP2Q9UDT6 1046 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 ORC4O43929 436 aa27.57■■■□□ 2
NEK9-203ENST00000553945 RAD21O60216 631 aa27.57■■■□□ 2
NEK9-203ENST00000553945 PSMC4P43686 418 aa27.57■■■□□ 2
NEK9-203ENST00000553945 LPAR1Q92633 364 aa27.57■■■□□ 2
NEK9-203ENST00000553945 ABHD8Q96I13 439 aa27.57■■■□□ 2
NEK9-203ENST00000553945 GOPCQ9HD26 462 aa27.57■■■□□ 2
NEK9-203ENST00000553945 CTNNA3Q9UI47 895 aa27.57■■■□□ 2
NEK9-203ENST00000553945 PLIN4Q96Q06 1357 aa27.57■■■□□ 2
NEK9-203ENST00000553945 FMNL1O95466 1100 aaPredicted RBP27.56■■■□□ 2
NEK9-203ENST00000553945 FBXO46Q6PJ61 603 aaPredicted RBP27.56■■■□□ 2
NEK9-203ENST00000553945 TBC1D10CQ8IV04 446 aa27.56■■■□□ 2
NEK9-203ENST00000553945 TANGO6Q9C0B7 1094 aa27.56■■■□□ 2
NEK9-203ENST00000553945 NBPF3Q9H094 633 aa27.56■■■□□ 2
NEK9-203ENST00000553945 MTMR4Q9NYA4 1195 aa27.56■■■□□ 2
NEK9-203ENST00000553945 MYH4Q9Y623 1939 aa27.56■■■□□ 2
NEK9-203ENST00000553945 SGSM2O43147 1006 aa27.55■■■□□ 2
NEK9-203ENST00000553945 FGRP09769 529 aa27.55■■■□□ 2
NEK9-203ENST00000553945 CTGFP29279 349 aa27.55■■■□□ 2
NEK9-203ENST00000553945 FAM110CQ1W6H9 321 aa27.55■■■□□ 2
NEK9-203ENST00000553945 AKNAD1Q5T1N1 836 aa27.55■■■□□ 2
NEK9-203ENST00000553945 MFSD6Q6ZSS7 791 aa27.55■■■□□ 2
NEK9-203ENST00000553945 TRIM47Q96LD4 638 aa27.55■■■□□ 2
NEK9-203ENST00000553945 MGAMO43451 1857 aa27.54■■■□□ 2
NEK9-203ENST00000553945 TTLL1O95922 423 aa27.54■■■□□ 2
NEK9-203ENST00000553945 IMMTQ16891 758 aaKnown RBP27.54■■■□□ 2
NEK9-203ENST00000553945 STAG1Q8WVM7 1258 aa27.54■■■□□ 2
NEK9-203ENST00000553945 RNF41Q9H4P4 317 aaPredicted RBP27.54■■■□□ 2
NEK9-203ENST00000553945 WDR46O15213 610 aaKnown RBP27.53■■■□□ 2
NEK9-203ENST00000553945 PCP11498 1178 aaKnown RBP27.53■■■□□ 2
NEK9-203ENST00000553945 FCGRTP55899 365 aa27.53■■■□□ 2
NEK9-203ENST00000553945 PTH1RQ03431 593 aa27.53■■■□□ 2
NEK9-203ENST00000553945 PAGR1Q9BTK6 254 aa27.53■■■□□ 2
NEK9-203ENST00000553945 MORF4L1Q9UBU8 362 aa27.53■■■□□ 2
NEK9-203ENST00000553945 PTPN22Q9Y2R2 807 aa27.53■■■□□ 2
NEK9-203ENST00000553945 PEX10O60683 326 aa27.52■■■□□ 2
NEK9-203ENST00000553945 GNRH1P01148 92 aa27.52■■■□□ 2
NEK9-203ENST00000553945 GTF3C2Q8WUA4 911 aaPredicted RBP27.52■■■□□ 2
NEK9-203ENST00000553945 RBPJLQ9UBG7 517 aa27.52■■■□□ 2
NEK9-203ENST00000553945 HTTP42858 3142 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 F5H6K3 240 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 NMT2O60551 498 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 KLRC3Q07444 240 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 COG2Q14746 738 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 LRRC47Q8N1G4 583 aaKnown RBP27.51■■□□□ 1.99
NEK9-203ENST00000553945 GPRC5AQ8NFJ5 357 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 MKL1Q969V6 931 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 TXNRD2Q9NNW7 524 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 HPS5Q9UPZ3 1129 aa27.51■■□□□ 1.99
NEK9-203ENST00000553945 NEDD4P46934 1319 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 CAPN15O75808 1086 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 HOXD10P28358 340 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 PPP4R3BQ5MIZ7 849 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 SAMD1Q6SPF0 538 aaPredicted RBP27.5■■□□□ 1.99
NEK9-203ENST00000553945 ESYT1Q9BSJ8 1104 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 IL17RBQ9NRM6 502 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 STX8Q9UNK0 236 aa27.5■■□□□ 1.99
NEK9-203ENST00000553945 SPDYE16A6NNV3 312 aaPredicted RBP27.49■■□□□ 1.99
NEK9-203ENST00000553945 TNPO2O14787 897 aaKnown RBP27.49■■□□□ 1.99
NEK9-203ENST00000553945 FLOT1O75955 427 aa27.49■■□□□ 1.99
NEK9-203ENST00000553945 NDUFB10O96000 172 aa27.49■■□□□ 1.99
NEK9-203ENST00000553945 FAM83BQ5T0W9 1011 aa27.49■■□□□ 1.99
NEK9-203ENST00000553945 POTEEQ6S8J3 1075 aa27.49■■□□□ 1.99
NEK9-203ENST00000553945 HOXC10Q9NYD6 342 aa27.49■■□□□ 1.99
NEK9-203ENST00000553945 RABGAP1Q9Y3P9 1069 aa27.49■■□□□ 1.99
NEK9-203ENST00000553945 U3KPZ7 1027 aaPredicted RBP27.49■■□□□ 1.99
NEK9-203ENST00000553945 ERVK-9P63128 1117 aa27.48■■□□□ 1.99
NEK9-203ENST00000553945 ERVK-24P63145 666 aa27.48■■□□□ 1.99
NEK9-203ENST00000553945 KIAA1211Q6ZU35 1233 aa27.48■■□□□ 1.99
NEK9-203ENST00000553945 ESR2Q92731 530 aa27.48■■□□□ 1.99
NEK9-203ENST00000553945 NUP88Q99567 741 aaPredicted RBP27.48■■□□□ 1.99
NEK9-203ENST00000553945 SYNPO2Q9UMS6 1093 aa27.48■■□□□ 1.99
NEK9-203ENST00000553945 CCDC85CA6NKD9 419 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 PRMT2P55345 433 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 IFFO2Q5TF58 517 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 LBX2Q6XYB7 198 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 SRRDQ9UH36 339 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 PTCH2Q9Y6C5 1203 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 RLFQ13129 1914 aa27.47■■□□□ 1.99
NEK9-203ENST00000553945 MYPNQ86TC9 1320 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 CDC45O75419 566 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 CNMDO75829 334 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 DSG3P32926 999 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 Q3C1V9 767 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 GMCL1P1Q8NEA9 526 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 NKX2-3Q8TAU0 364 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 FBXO28Q9NVF7 368 aa27.46■■□□□ 1.99
NEK9-203ENST00000553945 B4E1Z4 1266 aa27.45■■□□□ 1.98
NEK9-203ENST00000553945 PRKCZQ05513 592 aa27.45■■□□□ 1.98
NEK9-203ENST00000553945 SLFN13Q68D06 897 aa27.45■■□□□ 1.98
NEK9-203ENST00000553945 CASC1Q6TDU7 716 aa27.45■■□□□ 1.98
NEK9-203ENST00000553945 CCAR1Q8IX12 1150 aaKnown RBP27.45■■□□□ 1.98
NEK9-203ENST00000553945 MAP4K1Q92918 833 aa27.45■■□□□ 1.98
NEK9-203ENST00000553945 COA7Q96BR5 231 aa27.45■■□□□ 1.98
NEK9-203ENST00000553945 CHMP4CQ96CF2 233 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms