RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 RBM47A0AV96 593 aaKnown RBP4.81□□□□□ -1.64
SRP54-204ENST00000553923 UPK3BL1B0FP48 263 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 UPK3BL2E5RIL1 263 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 SYN1P17600 705 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 NFKB2Q00653 900 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 NFIXQ14938 502 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 SKOR2Q2VWA4 1001 aaPredicted RBP4.81□□□□□ -1.64
SRP54-204ENST00000553923 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 SPPL2CQ8IUH8 684 aa4.81□□□□□ -1.64
SRP54-204ENST00000553923 DHX38Q92620 1227 aaKnown RBP4.81□□□□□ -1.64
SRP54-204ENST00000553923 MBD1Q9UIS9 605 aaPredicted RBP4.81□□□□□ -1.64
SRP54-204ENST00000553923 SHISA3A0PJX4 238 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 TFE3P19532 575 aaPredicted RBP4.8□□□□□ -1.64
SRP54-204ENST00000553923 LIG3P49916 1009 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 GALK1P51570 392 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 RPL6Q02878 288 aaKnown RBP4.8□□□□□ -1.64
SRP54-204ENST00000553923 NLRX1Q86UT6 975 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 ANKS4BQ8N8V4 417 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 CYB5D2Q8WUJ1 264 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 RNF141Q8WVD5 230 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 DACT3Q96B18 629 aaPredicted RBP4.8□□□□□ -1.64
SRP54-204ENST00000553923 VWCEQ96DN2 955 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 FRMD6Q96NE9 622 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 EPB41L4AQ9HCS5 686 aaPredicted RBP4.8□□□□□ -1.64
SRP54-204ENST00000553923 GPR160Q9UJ42 338 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 KCNH3Q9ULD8 1083 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 CORINQ9Y5Q5 1042 aa4.8□□□□□ -1.64
SRP54-204ENST00000553923 HRKO00198 91 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 P4HBP07237 508 aaKnown RBP4.79□□□□□ -1.64
SRP54-204ENST00000553923 LTKP29376 864 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 PDE6BP35913 854 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 CHRNEQ04844 493 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 PDE4BQ07343 736 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 PDE4CQ08493 712 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 CCDC85BQ15834 202 aaPredicted RBP4.79□□□□□ -1.64
SRP54-204ENST00000553923 TSNAXIP1Q2TAA8 658 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 TMEM201Q5SNT2 666 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 TMEM132EQ6IEE7 984 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 DBX2Q6ZNG2 339 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 TMEM151BQ8IW70 566 aa4.79□□□□□ -1.64
SRP54-204ENST00000553923 ZSCAN29Q8IWY8 852 aaPredicted RBP4.79□□□□□ -1.64
SRP54-204ENST00000553923 OTOL1A6NHN0 477 aaPredicted RBP4.78□□□□□ -1.64
SRP54-204ENST00000553923 PI3P19957 117 aa4.78□□□□□ -1.64
SRP54-204ENST00000553923 ATP2B2Q01814 1243 aa4.78□□□□□ -1.64
SRP54-204ENST00000553923 DUSP4Q13115 394 aa4.78□□□□□ -1.64
SRP54-204ENST00000553923 GGNQ86UU5 652 aa4.78□□□□□ -1.64
SRP54-204ENST00000553923 MIR1-1HGQ9H1L0 117 aa4.78□□□□□ -1.64
SRP54-204ENST00000553923 OR14I1A6ND48 311 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 RFXAPO00287 272 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 EIF4BP23588 611 aaKnown RBP4.77□□□□□ -1.65
SRP54-204ENST00000553923 GNA15P30679 374 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 SLFN12Q8IYM2 578 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 USHBP1Q8N6Y0 703 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 SIGLEC10Q96LC7 697 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 RNF19AQ9NV58 838 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 AK5Q9Y6K8 562 aa4.77□□□□□ -1.65
SRP54-204ENST00000553923 PRR36Q9H6K5 1346 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 FAM221AA4D161 298 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 SLC22A31A6NKX4 558 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 IRS4O14654 1257 aaPredicted RBP4.76□□□□□ -1.65
SRP54-204ENST00000553923 BRD1O95696 1058 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 LDHBP07195 334 aaKnown RBP4.76□□□□□ -1.65
SRP54-204ENST00000553923 EPHB3P54753 998 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 YBX1P67809 324 aaKnown RBP4.76□□□□□ -1.65
SRP54-204ENST00000553923 SRSF3P84103 164 aaKnown RBP4.76□□□□□ -1.65
SRP54-204ENST00000553923 MAP3K11Q16584 847 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 SIRT2Q8IXJ6 389 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 TMEFF1Q8IYR6 380 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 FAM13CQ8NE31 585 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 KREMEN1Q96MU8 473 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 CNTD2Q9H8S5 307 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 TLR6Q9Y2C9 796 aa4.76□□□□□ -1.65
SRP54-204ENST00000553923 N4BP3O15049 544 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 NRDCO43847 1150 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 CILPO75339 1184 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 PLCG1P19174 1290 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 LMNB1P20700 586 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 CCDC84Q86UT8 332 aaPredicted RBP4.75□□□□□ -1.65
SRP54-204ENST00000553923 FEZF2Q8TBJ5 459 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 JARID2Q92833 1246 aaPredicted RBP4.75□□□□□ -1.65
SRP54-204ENST00000553923 CRTAC1Q9NQ79 661 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 IRAK3Q9Y616 596 aa4.75□□□□□ -1.65
SRP54-204ENST00000553923 CHURC1-FNTBB4DL54 471 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 VIPR1P32241 457 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 KIR2DL1P43626 348 aaPredicted RBP4.74□□□□□ -1.65
SRP54-204ENST00000553923 KIR2DL2P43627 348 aaPredicted RBP4.74□□□□□ -1.65
SRP54-204ENST00000553923 AFF3P51826 1226 aaKnown RBP4.74□□□□□ -1.65
SRP54-204ENST00000553923 ADGRF1Q5T601 910 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 MEI1Q5TIA1 1274 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 PRRT2Q7Z6L0 340 aaPredicted RBP4.74□□□□□ -1.65
SRP54-204ENST00000553923 PHC3Q8NDX5 983 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 ENOX1Q8TC92 643 aaKnown RBP4.74□□□□□ -1.65
SRP54-204ENST00000553923 SYTL4Q96C24 671 aaPredicted RBP4.74□□□□□ -1.65
SRP54-204ENST00000553923 ASPNQ9BXN1 380 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 HDAC8Q9BY41 377 aa4.74□□□□□ -1.65
SRP54-204ENST00000553923 TMEM82A0PJX8 343 aa4.73□□□□□ -1.65
SRP54-204ENST00000553923 DNAJA2O60884 412 aa4.73□□□□□ -1.65
SRP54-204ENST00000553923 PRPF40AO75400 957 aaKnown RBP4.73□□□□□ -1.65
SRP54-204ENST00000553923 USP2O75604 605 aaPredicted RBP4.73□□□□□ -1.65
SRP54-204ENST00000553923 SASH1O94885 1247 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms