RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 VCAM1P19320 739 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 IRX3P78415 501 aaPredicted RBP11.05□□□□□ -0.64
CHD8-206ENST00000553870 COL13A1Q5TAT6 717 aaPredicted RBP11.05□□□□□ -0.64
CHD8-206ENST00000553870 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 CTU1Q7Z7A3 348 aaKnown RBP11.05□□□□□ -0.64
CHD8-206ENST00000553870 ESR2Q92731 530 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 MAP4K1Q92918 833 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 TTC14Q96N46 770 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 ESYT1Q9BSJ8 1104 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 PTPRFP10586 1907 aa11.05□□□□□ -0.64
CHD8-206ENST00000553870 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
CHD8-206ENST00000553870 HOXD10P28358 340 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 NOVP48745 357 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 HAND2P61296 217 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
CHD8-206ENST00000553870 ATP2B2Q01814 1243 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 COG2Q14746 738 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 FAM110CQ1W6H9 321 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 FAM47AQ5JRC9 791 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 LBX2Q6XYB7 198 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 CEP95Q96GE4 821 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
CHD8-206ENST00000553870 KRT23Q9C075 422 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 IL25Q9H293 177 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 CLIP2Q9UDT6 1046 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 CPA4Q9UI42 421 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 MYPNQ86TC9 1320 aa11.04□□□□□ -0.64
CHD8-206ENST00000553870 MYH8P13535 1937 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 F5H6K3 240 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 PRMT2P55345 433 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 HERVK_113P62684 666 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 PTH1RQ03431 593 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 KLRC3Q07444 240 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 DGKZQ13574 1117 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 ZYXQ15942 572 aaKnown RBP11.03□□□□□ -0.64
CHD8-206ENST00000553870 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
CHD8-206ENST00000553870 INCENPQ9NQS7 918 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 IL17RBQ9NRM6 502 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 MORF4L1Q9UBU8 362 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 RABGAP1Q9Y3P9 1069 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 TACC3Q9Y6A5 838 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 CASP8AP2Q9UKL3 1982 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 LOC285556D6RIA3 1793 aa11.03□□□□□ -0.64
CHD8-206ENST00000553870 TRDNQ13061 729 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
CHD8-206ENST00000553870 IQCA1Q86XH1 822 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 DGKHQ86XP1 1220 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 TBC1D10CQ8IV04 446 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 GPRC5AQ8NFJ5 357 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 ANKS1AQ92625 1134 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 LSG1Q9H089 658 aaKnown RBP11.02□□□□□ -0.65
CHD8-206ENST00000553870 EFCC1Q9HA90 598 aa11.02□□□□□ -0.65
CHD8-206ENST00000553870 EPB41L2O43491 1005 aaKnown RBP11.01□□□□□ -0.65
CHD8-206ENST00000553870 EIF5BO60841 1220 aaKnown RBP11.01□□□□□ -0.65
CHD8-206ENST00000553870 CYP21A2P08686 494 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
CHD8-206ENST00000553870 DSG3P32926 999 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 FCGRTP55899 365 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 CCNA1P78396 465 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 RCSD1Q6JBY9 416 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 CLEC10AQ8IUN9 316 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 TNS4Q8IZW8 715 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 ANKRD13CQ8N6S4 541 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 CD99L2Q8TCZ2 262 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 RBPJLQ9UBG7 517 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 STX8Q9UNK0 236 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
CHD8-206ENST00000553870 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
CHD8-206ENST00000553870 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
CHD8-206ENST00000553870 PLA2G6O60733 806 aa11□□□□□ -0.65
CHD8-206ENST00000553870 KDM4AO75164 1064 aa11□□□□□ -0.65
CHD8-206ENST00000553870 FLOT1O75955 427 aa11□□□□□ -0.65
CHD8-206ENST00000553870 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
CHD8-206ENST00000553870 FDX1P10109 184 aa11□□□□□ -0.65
CHD8-206ENST00000553870 PSMC4P43686 418 aa11□□□□□ -0.65
CHD8-206ENST00000553870 NECTIN1Q15223 517 aa11□□□□□ -0.65
CHD8-206ENST00000553870 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
CHD8-206ENST00000553870 RNF20Q5VTR2 975 aa11□□□□□ -0.65
CHD8-206ENST00000553870 SLFN13Q68D06 897 aa11□□□□□ -0.65
CHD8-206ENST00000553870 FBXO46Q6PJ61 603 aaPredicted RBP11□□□□□ -0.65
CHD8-206ENST00000553870 OTOP1Q7RTM1 612 aa11□□□□□ -0.65
CHD8-206ENST00000553870 SPICE1Q8N0Z3 855 aa11□□□□□ -0.65
CHD8-206ENST00000553870 NCOA7Q8NI08 942 aa11□□□□□ -0.65
CHD8-206ENST00000553870 GMCL1Q96IK5 515 aa11□□□□□ -0.65
CHD8-206ENST00000553870 MTA3Q9BTC8 594 aa11□□□□□ -0.65
CHD8-206ENST00000553870 TANGO6Q9C0B7 1094 aa11□□□□□ -0.65
CHD8-206ENST00000553870 ANO2Q9NQ90 1003 aa11□□□□□ -0.65
CHD8-206ENST00000553870 ZSWIM5Q9P217 1185 aa11□□□□□ -0.65
CHD8-206ENST00000553870 FEM1BQ9UK73 627 aa11□□□□□ -0.65
CHD8-206ENST00000553870 ADAMTS5Q9UNA0 930 aa11□□□□□ -0.65
CHD8-206ENST00000553870 SPDYE16A6NNV3 312 aaPredicted RBP10.99□□□□□ -0.65
CHD8-206ENST00000553870 RAD21O60216 631 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 REC8O95072 547 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 NDUFB10O96000 172 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms