RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 EEF2P13639 858 aaKnown RBP13.7□□□□□ -0.22
NEK9-202ENST00000553823 KIF5BP33176 963 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 MKL1Q969V6 931 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 DOCK1Q14185 1865 aa13.7□□□□□ -0.22
NEK9-202ENST00000553823 CTNND1O60716 968 aaKnown RBP13.69□□□□□ -0.22
NEK9-202ENST00000553823 DTNBO60941 627 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 GRM4Q14833 912 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 NTRK3Q16288 839 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 CDC37L1Q7L3B6 337 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
NEK9-202ENST00000553823 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 KIF3AQ9Y496 699 aa13.69□□□□□ -0.22
NEK9-202ENST00000553823 SSC5DA1L4H1 1573 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 IFNAR1P17181 557 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 GNAQP50148 359 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 NUCB2P80303 420 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 TMTC3Q6ZXV5 915 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 ORC3Q9UBD5 711 aaPredicted RBP13.68□□□□□ -0.22
NEK9-202ENST00000553823 SYNPO2Q9UMS6 1093 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
NEK9-202ENST00000553823 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 PARP1P09874 1014 aaKnown RBP13.67□□□□□ -0.22
NEK9-202ENST00000553823 PDCP20941 246 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 INPP5BP32019 993 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 NF2P35240 595 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
NEK9-202ENST00000553823 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 CDCA5Q96FF9 252 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 WRNIP1Q96S55 665 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 GLIS2Q9BZE0 524 aaPredicted RBP13.67□□□□□ -0.22
NEK9-202ENST00000553823 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
NEK9-202ENST00000553823 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 PPP1R12BO60237 982 aaPredicted RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 USP2O75604 605 aaPredicted RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 PLEKHA8P1O95397 391 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 SNHG28P0DPA3 235 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 PDHBP11177 359 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 PDIA4P13667 645 aaKnown RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 SYT1P21579 422 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 ASPRV1Q53RT3 343 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
NEK9-202ENST00000553823 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 PHKBQ93100 1093 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 LZTS2Q9BRK4 669 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 SLC26A6Q9BXS9 759 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 NMRK2Q9NPI5 230 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 TMX2Q9Y320 296 aa13.66□□□□□ -0.22
NEK9-202ENST00000553823 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 STX6O43752 255 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 FUT2Q10981 343 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 PRKG1Q13976 671 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 NOL9Q5SY16 702 aaKnown RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 MAP1SQ66K74 1059 aaPredicted RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 USP17L2Q6R6M4 530 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 SRBD1Q8N5C6 995 aaKnown RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 GMCL1P1Q8NEA9 526 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 ZNF526Q8TF50 670 aaPredicted RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
NEK9-202ENST00000553823 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 GOPCQ9HD26 462 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
NEK9-202ENST00000553823 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 F5H6K3 240 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 RAD21O60216 631 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 GOLGA8HP0CJ92 632 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 SMARCA1P28370 1054 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 ECE1P42892 770 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 KLRC3Q07444 240 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms