RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 LPAR1Q92633 364 aa24.23■■□□□ 1.47
FOXA1-203ENST00000553751 MYPNQ86TC9 1320 aa24.22■■□□□ 1.47
FOXA1-203ENST00000553751 ATP2B2Q01814 1243 aa24.22■■□□□ 1.47
FOXA1-203ENST00000553751 RBPJLQ9UBG7 517 aa24.22■■□□□ 1.47
FOXA1-203ENST00000553751 TACC3Q9Y6A5 838 aa24.22■■□□□ 1.47
FOXA1-203ENST00000553751 TNPO2O14787 897 aaKnown RBP24.21■■□□□ 1.47
FOXA1-203ENST00000553751 HOXD10P28358 340 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 PRKCZQ05513 592 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 LBX2Q6XYB7 198 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 SPICE1Q8N0Z3 855 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 ARMC5Q96C12 935 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 IL25Q9H293 177 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 NYAP2Q9P242 653 aa24.21■■□□□ 1.47
FOXA1-203ENST00000553751 CENPFP49454 3210 aa24.2■■□□□ 1.47
FOXA1-203ENST00000553751 RLFQ13129 1914 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 SPDYE16A6NNV3 312 aaPredicted RBP24.2■■□□□ 1.46
FOXA1-203ENST00000553751 GPRC5AQ8NFJ5 357 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 NEDD1Q8NHV4 660 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 CEP95Q96GE4 821 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 TANGO6Q9C0B7 1094 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 INCENPQ9NQS7 918 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 A0A0G2JMZ2 1700 aa24.2■■□□□ 1.46
FOXA1-203ENST00000553751 WDR46O15213 610 aaKnown RBP24.19■■□□□ 1.46
FOXA1-203ENST00000553751 CNMDO75829 334 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 FGRP09769 529 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 TSPY3P0CV98 308 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 TSPY8P0CW00 308 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 ERVK-9P63128 1117 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 ERVK-24P63145 666 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 FAM47AQ5JRC9 791 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 PAGR1Q9BTK6 254 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 GOPCQ9HD26 462 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 MTMR4Q9NYA4 1195 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 GABRQQ9UN88 632 aa24.19■■□□□ 1.46
FOXA1-203ENST00000553751 ORC4O43929 436 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 TFAP4Q01664 338 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 Q3C1V9 767 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 SLC9C1Q4G0N8 1177 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 NBPF3Q9H094 633 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 RABGAP1Q9Y3P9 1069 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 LAMA4Q16363 1823 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 PARP14Q460N5 1801 aa24.18■■□□□ 1.46
FOXA1-203ENST00000553751 SOX10P56693 466 aa24.17■■□□□ 1.46
FOXA1-203ENST00000553751 HAND2P61296 217 aa24.17■■□□□ 1.46
FOXA1-203ENST00000553751 RAET1EQ8TD07 263 aa24.17■■□□□ 1.46
FOXA1-203ENST00000553751 ZNF333Q96JL9 665 aa24.17■■□□□ 1.46
FOXA1-203ENST00000553751 CLIP2Q9UDT6 1046 aa24.17■■□□□ 1.46
FOXA1-203ENST00000553751 MYH4Q9Y623 1939 aa24.17■■□□□ 1.46
FOXA1-203ENST00000553751 RAD50Q92878 1312 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 CHMLP26374 656 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 FLT3LGP49771 235 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 COG2Q14746 738 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 SKAP1Q86WV1 359 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 SH3TC2Q8TF17 1288 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 MKL1Q969V6 931 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 COA7Q96BR5 231 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 DSCC1Q9BVC3 393 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 BTBD7Q9P203 1132 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 DOCK3Q8IZD9 2030 aa24.16■■□□□ 1.46
FOXA1-203ENST00000553751 TTLL1O95922 423 aa24.15■■□□□ 1.46
FOXA1-203ENST00000553751 TBC1D10CQ8IV04 446 aa24.15■■□□□ 1.46
FOXA1-203ENST00000553751 PORCNQ9H237 461 aa24.15■■□□□ 1.46
FOXA1-203ENST00000553751 HOXC10Q9NYD6 342 aa24.15■■□□□ 1.46
FOXA1-203ENST00000553751 SYNPO2Q9UMS6 1093 aa24.15■■□□□ 1.46
FOXA1-203ENST00000553751 TSPY2A6NKD2 308 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 RAD21O60216 631 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 FLOT1O75955 427 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 NDUFB10O96000 172 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 DSG3P32926 999 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 FAM83BQ5T0W9 1011 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 PLXNB2O15031 1838 aa24.14■■□□□ 1.45
FOXA1-203ENST00000553751 F5H6K3 240 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 RANBP6O60518 1105 aaKnown RBP24.13■■□□□ 1.45
FOXA1-203ENST00000553751 NEFLP07196 543 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 MAPK4P31152 587 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 GRK4P32298 578 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 KLRC3Q07444 240 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 IRF5Q13568 498 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 NBPF11Q86T75 865 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 LRRC47Q8N1G4 583 aaKnown RBP24.13■■□□□ 1.45
FOXA1-203ENST00000553751 STAG1Q8WVM7 1258 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 CCDC136Q96JN2 1154 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 IL17RBQ9NRM6 502 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 GJD2Q9UKL4 321 aa24.13■■□□□ 1.45
FOXA1-203ENST00000553751 RBBP6Q7Z6E9 1792 aaKnown RBP24.12■■□□□ 1.45
FOXA1-203ENST00000553751 NMT2O60551 498 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 RGS19P49795 217 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 AKNAD1Q5T1N1 836 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 GMCL1P1Q8NEA9 526 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 ATG4CQ96DT6 458 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 NUP88Q99567 741 aaPredicted RBP24.12■■□□□ 1.45
FOXA1-203ENST00000553751 TOMM22Q9NS69 142 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 FBXO28Q9NVF7 368 aa24.12■■□□□ 1.45
FOXA1-203ENST00000553751 ZNF213O14771 459 aa24.11■■□□□ 1.45
FOXA1-203ENST00000553751 PCP11498 1178 aaKnown RBP24.11■■□□□ 1.45
FOXA1-203ENST00000553751 CCNA1P78396 465 aa24.11■■□□□ 1.45
FOXA1-203ENST00000553751 RRP12Q5JTH9 1297 aaKnown RBP24.11■■□□□ 1.45
FOXA1-203ENST00000553751 GPR142Q7Z601 462 aa24.11■■□□□ 1.45
FOXA1-203ENST00000553751 MB21D1Q8N884 522 aa24.11■■□□□ 1.45
FOXA1-203ENST00000553751 SLAIN1Q8ND83 568 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms