RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 CNTNAP5Q8WYK1 1306 aa20.43■□□□□ 0.86
PSEN1-206ENST00000553447 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-206ENST00000553447 DEXIO95424 95 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 GH2P01242 217 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 GNAQP50148 359 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 JAG1P78504 1218 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 MIGA2Q7L4E1 593 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 LRRC47Q8N1G4 583 aaKnown RBP20.42■□□□□ 0.86
PSEN1-206ENST00000553447 CCDC82Q8N4S0 544 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 SRBD1Q8N5C6 995 aaKnown RBP20.42■□□□□ 0.86
PSEN1-206ENST00000553447 L3MBTL3Q96JM7 780 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-206ENST00000553447 AIFM3Q96NN9 605 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 GGA3Q9NZ52 723 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 NYAP2Q9P242 653 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 MAD2L2Q9UI95 211 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 ATP6V1DQ9Y5K8 247 aa20.42■□□□□ 0.86
PSEN1-206ENST00000553447 PRPF3O43395 683 aaKnown RBP20.41■□□□□ 0.86
PSEN1-206ENST00000553447 EEF2P13639 858 aaKnown RBP20.41■□□□□ 0.86
PSEN1-206ENST00000553447 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
PSEN1-206ENST00000553447 FBXO18Q8NFZ0 1043 aa20.41■□□□□ 0.86
PSEN1-206ENST00000553447 MKL1Q969V6 931 aa20.41■□□□□ 0.86
PSEN1-206ENST00000553447 MTMR7Q9Y216 660 aa20.41■□□□□ 0.86
PSEN1-206ENST00000553447 PITPNM2Q9BZ72 1349 aa20.41■□□□□ 0.86
PSEN1-206ENST00000553447 UBE2Q2LH0YL09 131 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
PSEN1-206ENST00000553447 ATP2B2Q01814 1243 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
PSEN1-206ENST00000553447 GUCY1B3Q02153 619 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 ICA1Q05084 483 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 FERMT3Q86UX7 667 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 LZTS2Q9BRK4 669 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
PSEN1-206ENST00000553447 DOCK1Q14185 1865 aa20.39■□□□□ 0.86
PSEN1-206ENST00000553447 DDX11L8A8MPP1 907 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 USP17L5A8MUK1 530 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 SNHG28P0DPA3 235 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 PDHBP11177 359 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 RESTQ13127 1097 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 NBR1Q14596 966 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 OTUD7BQ6GQQ9 843 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 RASGRP2Q7LDG7 609 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 SIAH1Q8IUQ4 282 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 CHAMP1Q96JM3 812 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 ZBTB21Q9ULJ3 1066 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 WDR90Q96KV7 1748 aa20.39■□□□□ 0.85
PSEN1-206ENST00000553447 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
PSEN1-206ENST00000553447 CAP2P40123 477 aa20.38■□□□□ 0.85
PSEN1-206ENST00000553447 ASPRV1Q53RT3 343 aa20.38■□□□□ 0.85
PSEN1-206ENST00000553447 NBPF12Q5TAG4 269 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-206ENST00000553447 USP17L2Q6R6M4 530 aa20.38■□□□□ 0.85
PSEN1-206ENST00000553447 HOOK2Q96ED9 719 aa20.38■□□□□ 0.85
PSEN1-206ENST00000553447 ZSCAN16Q9H4T2 348 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-206ENST00000553447 GJB4Q9NTQ9 266 aa20.38■□□□□ 0.85
PSEN1-206ENST00000553447 RBM27Q9P2N5 1060 aaKnown RBP20.38■□□□□ 0.85
PSEN1-206ENST00000553447 V9GY48 417 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-206ENST00000553447 BAZ2BQ9UIF8 2168 aaKnown RBP20.38■□□□□ 0.85
PSEN1-206ENST00000553447 PHF20L1A8MW92 1017 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 KLRF2D3W0D1 207 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 GOLGA8HP0CJ92 632 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 TRIM29Q14134 588 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 PKN1Q16512 942 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 FOXD4L6Q3SYB3 417 aaPredicted RBP20.37■□□□□ 0.85
PSEN1-206ENST00000553447 DCAF15Q66K64 600 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 KRT40Q6A162 431 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 MCTP1Q6DN14 999 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 FOXD4L3Q6VB84 417 aaPredicted RBP20.37■□□□□ 0.85
PSEN1-206ENST00000553447 SYNPO2Q9UMS6 1093 aa20.37■□□□□ 0.85
PSEN1-206ENST00000553447 GOLGA6L22H0YM25 854 aa20.36■□□□□ 0.85
PSEN1-206ENST00000553447 SMARCA1P28370 1054 aa20.36■□□□□ 0.85
PSEN1-206ENST00000553447 SLC35G1Q2M3R5 365 aa20.36■□□□□ 0.85
PSEN1-206ENST00000553447 USP50Q70EL3 339 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-206ENST00000553447 SPZ1Q9BXG8 430 aa20.36■□□□□ 0.85
PSEN1-206ENST00000553447 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
PSEN1-206ENST00000553447 hCG_1642624A0A1W2PR95 340 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 EPHX2P34913 555 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 ZNF543Q08ER8 600 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 GMCL1P1Q8NEA9 526 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 ZNF341Q9BYN7 854 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 ARHGEF10LQ9HCE6 1279 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 GINM1Q9NU53 330 aa20.35■□□□□ 0.85
PSEN1-206ENST00000553447 CYTH3O43739 400 aa20.34■□□□□ 0.85
PSEN1-206ENST00000553447 ASNSP08243 561 aa20.34■□□□□ 0.85
PSEN1-206ENST00000553447 PTMSP20962 102 aa20.34■□□□□ 0.85
PSEN1-206ENST00000553447 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-206ENST00000553447 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
PSEN1-206ENST00000553447 DCPSQ96C86 337 aaKnown RBP20.34■□□□□ 0.85
PSEN1-206ENST00000553447 SSC5DA1L4H1 1573 aa20.34■□□□□ 0.85
PSEN1-206ENST00000553447 A0A1W2PRG0 241 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 SCG2P13521 617 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 XBP1P17861 261 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 KIF23Q02241 960 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-206ENST00000553447 DNM1Q05193 864 aaKnown RBP20.33■□□□□ 0.85
PSEN1-206ENST00000553447 CCDC96Q2M329 555 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 GPATCH4Q5T3I0 446 aaKnown RBP20.33■□□□□ 0.85
PSEN1-206ENST00000553447 PRAMEF18Q5VWM3 479 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 FAM173BQ6P4H8 233 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 GPCPD1Q9NPB8 672 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 CNPY2Q9Y2B0 182 aa20.33■□□□□ 0.85
PSEN1-206ENST00000553447 IQCA1LA6NCM1 817 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms