RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 SWAP70Q9UH65 585 aa10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 PCDHB6Q9Y5E3 794 aa10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 RGPD3A6NKT7 1758 aaPredicted RBP10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 RGPD4Q7Z3J3 1758 aa10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 MYO3BQ8WXR4 1341 aa10.79□□□□□ -0.68
MTHFD1-203ENST00000553391 CYTH3O43739 400 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 ADCY5O95622 1261 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 AKR1B1P15121 316 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 SHMT1P34896 483 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 NLRP5P59047 1200 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 SF3B2Q13435 895 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 RTKN2Q8IZC4 609 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 CEP95Q96GE4 821 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 EHD4Q9H223 541 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 VPS33BQ9H267 617 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 ANO10Q9NW15 660 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 MTMR4Q9NYA4 1195 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 SERPINA10Q9UK55 444 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 CEP131Q9UPN4 1083 aa10.78□□□□□ -0.68
MTHFD1-203ENST00000553391 DLEC1Q9Y238 1755 aa10.77□□□□□ -0.68
MTHFD1-203ENST00000553391 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 TRIM75PA6NK02 468 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 YDJCA8MPS7 323 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 ESPNB1AK53 854 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 KLRF2D3W0D1 207 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 M0R2N6 131 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 ADAMTS3O15072 1205 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 C21orf2O43822 256 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 BMP15O95972 392 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 SNHG28P0DPA3 235 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 DPEP1P16444 411 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 CALML3P27482 149 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 SYKP43405 635 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 TRAPPC10P48553 1259 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 NFIAQ12857 509 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 PICALMQ13492 652 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 AOC3Q16853 763 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 GALNT17Q6IS24 598 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 METTL16Q86W50 562 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 DAGLBQ8NCG7 672 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 CCDC17Q96LX7 622 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 PSMD1Q99460 953 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 SPZ1Q9BXG8 430 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 DHX36Q9H2U1 1008 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 RIOX1Q9H6W3 641 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 BRMS1Q9HCU9 246 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 FAM198AQ9UFP1 575 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 SERPINB13Q9UIV8 391 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 TUBE1Q9UJT0 475 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 STX8Q9UNK0 236 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 PLIN4Q96Q06 1357 aa10.77□□□□□ -0.69
MTHFD1-203ENST00000553391 VIL1P09327 827 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 PARP1P09874 1014 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 ZNF165P49910 485 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 NLRP12P59046 1061 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 GRIN1Q05586 938 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 ZNF174Q15697 407 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 STX1AQ16623 288 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 NOM1Q5C9Z4 860 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 KRBA2Q6ZNG9 492 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 SH3BP5LQ7L8J4 393 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 KIAA0825Q8IV33 1275 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 BLIDQ8IZY5 108 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 C4orf32Q8N8J7 132 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 MKL1Q969V6 931 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 GMLQ99445 158 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 DNAJC25Q9H1X3 360 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 USP25Q9UHP3 1055 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 PCDHA4Q9UN74 947 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 PCDHAC2Q9Y5I4 1007 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 SLX4Q8IY92 1834 aa10.76□□□□□ -0.69
MTHFD1-203ENST00000553391 USP17L5A8MUK1 530 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 STXBP3O00186 592 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 PPIP5K2O43314 1243 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 ENTPD3O75355 529 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 HLA-DOAP06340 250 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 GOLGA8HP0CJ92 632 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 ATP2B1P20020 1258 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 CCDC93Q567U6 631 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 TTC38Q5R3I4 469 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 ZSCAN30Q86W11 494 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 CCDC125Q86Z20 511 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 FERMT2Q96AC1 680 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 PRMT6Q96LA8 375 aaPredicted RBP10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 PI4KBQ9UBF8 816 aa10.75□□□□□ -0.69
MTHFD1-203ENST00000553391 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms