RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 PLIN4Q96Q06 1357 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 PASKQ96RG2 1323 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 IFIT3O14879 490 aaKnown RBP11.44□□□□□ -0.58
TMEM260-204ENST00000553335 ST18O60284 1047 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 GH2P01242 217 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 INPP5BP32019 993 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 NEK4P51957 841 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 EXOSC10Q01780 885 aaKnown RBP11.44□□□□□ -0.58
TMEM260-204ENST00000553335 FMR1Q06787 632 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMEM260-204ENST00000553335 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
TMEM260-204ENST00000553335 RAB3GAP1Q15042 981 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 NOL9Q5SY16 702 aaKnown RBP11.44□□□□□ -0.58
TMEM260-204ENST00000553335 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 SCYL3Q8IZE3 742 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-204ENST00000553335 TTC14Q96N46 770 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 KIF2CQ99661 725 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 KANSL2Q9H9L4 492 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 PICK1Q9NRD5 415 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 PDRG1Q9NUG6 133 aa11.44□□□□□ -0.58
TMEM260-204ENST00000553335 TNKSO95271 1327 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 CPA1P15085 419 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 ANTXR2P58335 489 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 WTAPQ15007 396 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 SEPT2Q15019 361 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 ANKRD1Q15327 319 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 TMEM67Q5HYA8 995 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 Q6ZUG5 572 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 UPF3BQ9BZI7 483 aaKnown RBP11.43□□□□□ -0.58
TMEM260-204ENST00000553335 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-204ENST00000553335 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
TMEM260-204ENST00000553335 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 CCDC69A6NI79 296 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 UBE2Q2LH0YL09 131 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 GABBR2O75899 941 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 TTLL1O95922 423 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 ICA1Q05084 483 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 VGLL4Q14135 290 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
TMEM260-204ENST00000553335 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-204ENST00000553335 MOB2Q70IA6 237 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 NKX2-3Q8TAU0 364 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 CEP95Q96GE4 821 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 IL17RBQ9NRM6 502 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 MTMR4Q9NYA4 1195 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 NYAP2Q9P242 653 aa11.42□□□□□ -0.58
TMEM260-204ENST00000553335 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-204ENST00000553335 NMT2O60551 498 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 EEF2P13639 858 aaKnown RBP11.41□□□□□ -0.58
TMEM260-204ENST00000553335 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 LIFRP42702 1097 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 JAG1P78504 1218 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 HTRA3P83110 453 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 LDLRAD1Q5T700 205 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 CST9Q5W186 159 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 SYNE3Q6ZMZ3 975 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-204ENST00000553335 IGDCC4Q8TDY8 1250 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 ANKS1AQ92625 1134 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 SLC10A4Q96EP9 437 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 TCEANC2Q96MN5 208 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM260-204ENST00000553335 LRRC2Q9BYS8 371 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 AGXT2Q9BYV1 514 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 ELP3Q9H9T3 547 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 SNCAIPQ9Y6H5 919 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 PTPRFP10586 1907 aa11.41□□□□□ -0.58
TMEM260-204ENST00000553335 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
TMEM260-204ENST00000553335 PTPRAP18433 802 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 NOVP48745 357 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 MCM2P49736 904 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 AK2P54819 239 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 HUNKP57058 714 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 PPATQ06203 517 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 SEC23AQ15436 765 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 SHROOM1Q2M3G4 852 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-204ENST00000553335 ERO1BQ86YB8 467 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 BRF1Q92994 677 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 MKL1Q969V6 931 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 FEZ1Q99689 392 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 LY9Q9HBG7 655 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 SYNPO2Q9UMS6 1093 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
TMEM260-204ENST00000553335 SPDYE5A6NIY4 337 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms