RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 VPS53Q5VIR6 699 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 CWC27Q6UX04 472 aaKnown RBP18.22■□□□□ 0.51
SHMT2-204ENST00000553324 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.22■□□□□ 0.515e-8■■■□□ 18.8
SHMT2-204ENST00000553324 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 LOC285556D6RIA3 1793 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
SHMT2-204ENST00000553324 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
SHMT2-204ENST00000553324 FOXP2O15409 715 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 PRDM1O75626 825 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 MAPK4P31152 587 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 ERVK-24P63145 666 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 PRKCZQ05513 592 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 NEDD1Q8NHV4 660 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 MKL1Q969V6 931 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 TMEM106CQ9BVX2 250 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 TANGO6Q9C0B7 1094 aa18.21■□□□□ 0.51
SHMT2-204ENST00000553324 TTLL1O95922 423 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 PCP11498 1178 aaKnown RBP18.2■□□□□ 0.5
SHMT2-204ENST00000553324 GRK4P32298 578 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 FLT3LGP49771 235 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 TFAP4Q01664 338 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 CENPQQ7L2Z9 268 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-204ENST00000553324 ZNF589Q86UQ0 364 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-204ENST00000553324 MB21D1Q8N884 522 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 SLAIN1Q8ND83 568 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 PXYLP1Q8TE99 480 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 ZNF333Q96JL9 665 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 CLIP2Q9UDT6 1046 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 HTTP42858 3142 aa18.2■□□□□ 0.5
SHMT2-204ENST00000553324 IGKV6D-41A0A0C4DH26 115 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 TSPY2A6NKD2 308 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 FGRP09769 529 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 NT5C2P49902 561 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 UBXN2AP68543 259 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 Q3C1V9 767 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 SPICE1Q8N0Z3 855 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 GABRQQ9UN88 632 aa18.19■□□□□ 0.5
SHMT2-204ENST00000553324 CENPFP49454 3210 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 SPDYE16A6NNV3 312 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 F5H6K3 240 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 ORC4O43929 436 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 FLOT1O75955 427 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 DSG3P32926 999 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 SOX10P56693 466 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 MLLT1Q03111 559 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 KLRC3Q07444 240 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 SOCS4Q8WXH5 440 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 RNF41Q9H4P4 317 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 CTNNA3Q9UI47 895 aa18.18■□□□□ 0.5
SHMT2-204ENST00000553324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHMT2-204ENST00000553324 ZNF213O14771 459 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 RAD21O60216 631 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 ADCY3O60266 1144 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 FAM47AQ5JRC9 791 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 NUDT12Q9BQG2 462 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 DSCC1Q9BVC3 393 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 GJD2Q9UKL4 321 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
SHMT2-204ENST00000553324 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
SHMT2-204ENST00000553324 MFSD6Q6ZSS7 791 aa18.16■□□□□ 0.5
SHMT2-204ENST00000553324 PLEKHH3Q7Z736 793 aa18.16■□□□□ 0.5
SHMT2-204ENST00000553324 CNMDO75829 334 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 NEFLP07196 543 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
SHMT2-204ENST00000553324 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 GPR142Q7Z601 462 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 TRMT44Q8IYL2 757 aaKnown RBP18.15■□□□□ 0.5
SHMT2-204ENST00000553324 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 TOMM22Q9NS69 142 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 BTBD7Q9P203 1132 aa18.15■□□□□ 0.5
SHMT2-204ENST00000553324 NDUFB10O96000 172 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 CAPN2P17655 700 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 FAM83BQ5T0W9 1011 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 AKNAD1Q5T1N1 836 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 SPATC1LQ9H0A9 340 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 PORCNQ9H237 461 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 ADAMTS5Q9UNA0 930 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 STX8Q9UNK0 236 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 IVNS1ABPQ9Y6Y0 642 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 RAD50Q92878 1312 aa18.14■□□□□ 0.49
SHMT2-204ENST00000553324 STRNO43815 780 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 PEX10O60683 326 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 CHMLP26374 656 aa18.13■□□□□ 0.49
SHMT2-204ENST00000553324 RGS2P41220 211 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms