RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 COG2Q14746 738 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 EVI5LQ96CN4 794 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
ACTN1-207ENST00000553290 NACAP1Q9BZK3 213 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 UNC93B1Q9H1C4 597 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 PORCNQ9H237 461 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 MKNK2Q9HBH9 465 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 ZNF287Q9HBT7 754 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 CWC22Q9HCG8 908 aaKnown RBP15.49■□□□□ 0.07
ACTN1-207ENST00000553290 PLXNB2O15031 1838 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 CNMDO75829 334 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 XRCC5P13010 732 aaKnown RBP15.48■□□□□ 0.07
ACTN1-207ENST00000553290 EEF2P13639 858 aaKnown RBP15.48■□□□□ 0.07
ACTN1-207ENST00000553290 GPR142Q7Z601 462 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 PLEKHH3Q7Z736 793 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 TICAM2Q86XR7 235 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 CLEC10AQ8IUN9 316 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 SMC5Q8IY18 1101 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
ACTN1-207ENST00000553290 IFNL3Q8IZI9 196 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 EXOC6Q8TAG9 804 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 TANGO6Q9C0B7 1094 aa15.48■□□□□ 0.07
ACTN1-207ENST00000553290 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-207ENST00000553290 WDR46O15213 610 aaKnown RBP15.47■□□□□ 0.07
ACTN1-207ENST00000553290 SGPL1O95470 568 aa15.47■□□□□ 0.07
ACTN1-207ENST00000553290 RASA1P20936 1047 aa15.47■□□□□ 0.07
ACTN1-207ENST00000553290 U2AF1L4Q8WU68 220 aaKnown RBP15.47■□□□□ 0.07
ACTN1-207ENST00000553290 SHISA4Q96DD7 197 aa15.47■□□□□ 0.07
ACTN1-207ENST00000553290 GOPCQ9HD26 462 aa15.47■□□□□ 0.07
ACTN1-207ENST00000553290 BTBD7Q9P203 1132 aa15.47■□□□□ 0.07
ACTN1-207ENST00000553290 CYP2B6P20813 491 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 RGS2P41220 211 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 ATP2B2Q01814 1243 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 KIAA1755Q5JYT7 1200 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 MORN1Q5T089 497 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 ZNF444Q8N0Y2 327 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-207ENST00000553290 MB21D1Q8N884 522 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 USP6NLQ92738 828 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 LNPKQ9C0E8 428 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 NAPBQ9H115 298 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 PAK6Q9NQU5 681 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-207ENST00000553290 IVNS1ABPQ9Y6Y0 642 aa15.46■□□□□ 0.07
ACTN1-207ENST00000553290 RPTORQ8N122 1335 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 RLFQ13129 1914 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 GREB1LQ9C091 1923 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-207ENST00000553290 FLOT1O75955 427 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 SLC3A2P08195 630 aaKnown RBP15.45■□□□□ 0.06
ACTN1-207ENST00000553290 DSG3P32926 999 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 PDE4BQ07343 736 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 WDR78Q5VTH9 848 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 B4GALNT3Q6L9W6 998 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 CHD1LQ86WJ1 897 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 SPICE1Q8N0Z3 855 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 STK11IPQ8N1F8 1099 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 TRIB2Q92519 343 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 DEFB118Q96PH6 123 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.45■□□□□ 0.06
ACTN1-207ENST00000553290 NYAP2Q9P242 653 aa15.45■□□□□ 0.06
ACTN1-207ENST00000553290 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
ACTN1-207ENST00000553290 SLC15A5A6NIM6 579 aa15.44■□□□□ 0.06
ACTN1-207ENST00000553290 IGHDP01880 384 aa15.44■□□□□ 0.06
ACTN1-207ENST00000553290 PTPREP23469 700 aa15.44■□□□□ 0.06
ACTN1-207ENST00000553290 NUCB1Q02818 461 aa15.44■□□□□ 0.06
ACTN1-207ENST00000553290 APBA2Q99767 749 aa15.44■□□□□ 0.06
ACTN1-207ENST00000553290 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.44■□□□□ 0.06
ACTN1-207ENST00000553290 HMX1Q9NP08 348 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-207ENST00000553290 HELLSQ9NRZ9 838 aa15.44■□□□□ 0.06
ACTN1-207ENST00000553290 A0A0G2JMZ2 1700 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 TRIM6-TRIM34B2RNG4 842 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 STRNO43815 780 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 TFRCP02786 760 aaKnown RBP15.43■□□□□ 0.06
ACTN1-207ENST00000553290 ZKSCAN1P17029 563 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-207ENST00000553290 PPARAQ07869 468 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 MAP2K5Q13163 448 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 MAP3K21Q5TCX8 1036 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 UBE2Q1Q7Z7E8 422 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 SHCBP1Q8NEM2 672 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 MOV10L1Q9BXT6 1211 aaKnown RBP15.43■□□□□ 0.06
ACTN1-207ENST00000553290 SPATC1LQ9H0A9 340 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 CRISPLD2Q9H0B8 497 aa15.43■□□□□ 0.06
ACTN1-207ENST00000553290 IGKV6D-41A0A0C4DH26 115 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 RAD21O60216 631 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 PRDM1O75626 825 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 FARP2O94887 1054 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-207ENST00000553290 TRIM32Q13049 653 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 GRB14Q14449 540 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 CCDC129Q6ZRS4 1044 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 ATG4CQ96DT6 458 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 OSBPL3Q9H4L5 887 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 PARP14Q460N5 1801 aa15.42■□□□□ 0.06
ACTN1-207ENST00000553290 HOXC6P09630 235 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 TSPY3P0CV98 308 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 TSPY8P0CW00 308 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
ACTN1-207ENST00000553290 PLS1Q14651 629 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 MCMDC2Q4G0Z9 681 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 MKL1Q969V6 931 aa15.41■□□□□ 0.06
ACTN1-207ENST00000553290 HTATIP2Q9BUP3 242 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms