RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 NMT2O60551 498 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 RPS6KB1P23443 525 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 GJA5P36382 358 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 VEGFBP49765 207 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 CCDC84Q86UT8 332 aaPredicted RBP20.18■□□□□ 0.82
ITGA5-213ENST00000553071 FBXL16Q8N461 479 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 ENAHQ8N8S7 591 aaPredicted RBP20.18■□□□□ 0.82
ITGA5-213ENST00000553071 IGDCC4Q8TDY8 1250 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 MS4A4AQ96JQ5 239 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 ZKSCAN3Q9BRR0 538 aa20.18■□□□□ 0.82
ITGA5-213ENST00000553071 ZCCHC17Q9NP64 241 aaKnown RBP20.18■□□□□ 0.82
ITGA5-213ENST00000553071 CCL15-CCL14A0A0B4J2E2 113 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 A0A1W2PRG0 241 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 F5H6K3 240 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 ALDH1A1P00352 501 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 TM4SF4P48230 202 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 HMGCS2P54868 508 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 KLRC3Q07444 240 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 MKRN3Q13064 507 aaKnown RBP20.17■□□□□ 0.82
ITGA5-213ENST00000553071 SEC23AQ15436 765 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 CCL15Q16663 113 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 SYNE3Q6ZMZ3 975 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 TBC1D32Q96NH3 1257 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.17■□□□□ 0.82
ITGA5-213ENST00000553071 SLC45A1Q9Y2W3 748 aa20.17■□□□□ 0.82
ITGA5-213ENST00000553071 ANTXR2P58335 489 aa20.16■□□□□ 0.82
ITGA5-213ENST00000553071 KIF23Q02241 960 aaPredicted RBP20.16■□□□□ 0.82
ITGA5-213ENST00000553071 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
ITGA5-213ENST00000553071 RCSD1Q6JBY9 416 aa20.16■□□□□ 0.82
ITGA5-213ENST00000553071 CHST3Q7LGC8 479 aa20.16■□□□□ 0.82
ITGA5-213ENST00000553071 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
ITGA5-213ENST00000553071 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
ITGA5-213ENST00000553071 HTRA3P83110 453 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 GADL1Q6ZQY3 521 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 ANKRD23Q86SG2 305 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 CLEC10AQ8IUN9 316 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 PNMA1Q8ND90 353 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 GMCL1Q96IK5 515 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
ITGA5-213ENST00000553071 EMILIN3Q9NT22 766 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 PDRG1Q9NUG6 133 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 PNMA3Q9UL41 463 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 AGTPBP1Q9UPW5 1226 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 OTOFQ9HC10 1997 aa20.15■□□□□ 0.82
ITGA5-213ENST00000553071 SH2B2O14492 632 aaPredicted RBP20.14■□□□□ 0.81
ITGA5-213ENST00000553071 RAD21O60216 631 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 CALM1P0DP23 149 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 CALM2P0DP24 149 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 CALM3P0DP25 149 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 HOXA7P31268 230 aaPredicted RBP20.14■□□□□ 0.81
ITGA5-213ENST00000553071 RABEP1Q15276 862 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 ZYXQ15942 572 aaKnown RBP20.14■□□□□ 0.81
ITGA5-213ENST00000553071 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 SGMS1Q86VZ5 419 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 DCAF4Q8WV16 495 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 BRI3BPQ8WY22 251 aa20.14■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L15C9J2P7 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L13C9JLJ4 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L11C9JVI0 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L18D6R9N7 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L22D6RA61 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L17D6RBQ6 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L19D6RCP7 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L20D6RJB6 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 OSBPP22059 807 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 SLC1A4P43007 532 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 MAP2K1Q02750 393 aaPredicted RBP20.13■□□□□ 0.81
ITGA5-213ENST00000553071 USP17L24Q0WX57 530 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 LRRC47Q8N1G4 583 aaKnown RBP20.13■□□□□ 0.81
ITGA5-213ENST00000553071 NKX2-3Q8TAU0 364 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 MAP3K14Q99558 947 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 LY9Q9HBG7 655 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 SLC12A7Q9Y666 1083 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 ATAD5Q96QE3 1844 aa20.13■□□□□ 0.81
ITGA5-213ENST00000553071 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
ITGA5-213ENST00000553071 NDUFB10O96000 172 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 NEK4P51957 841 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 RCAN1P53805 252 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 PPP2R5BQ15173 497 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 GPATCH4Q5T3I0 446 aaKnown RBP20.12■□□□□ 0.81
ITGA5-213ENST00000553071 Q6ZUG5 572 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 IFNL1Q8IU54 200 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 AGXT2Q9BYV1 514 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 UPF3BQ9BZI7 483 aaKnown RBP20.12■□□□□ 0.81
ITGA5-213ENST00000553071 HOXC10Q9NYD6 342 aa20.12■□□□□ 0.81
ITGA5-213ENST00000553071 AOC2O75106 756 aa20.11■□□□□ 0.81
ITGA5-213ENST00000553071 DDAH1O94760 285 aa20.11■□□□□ 0.81
ITGA5-213ENST00000553071 BMP3P12645 472 aa20.11■□□□□ 0.81
ITGA5-213ENST00000553071 VCAM1P19320 739 aa20.11■□□□□ 0.81
ITGA5-213ENST00000553071 KIF5BP33176 963 aa20.11■□□□□ 0.81
ITGA5-213ENST00000553071 GTF3C2Q8WUA4 911 aaPredicted RBP20.11■□□□□ 0.81
ITGA5-213ENST00000553071 CHURC1Q8WUH1 139 aa20.11■□□□□ 0.81
ITGA5-213ENST00000553071 BTBD19C9JJ37 291 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 ST18O60284 1047 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 PLA2G6O60733 806 aa20.1■□□□□ 0.81
ITGA5-213ENST00000553071 IRX3P78415 501 aaPredicted RBP20.1■□□□□ 0.81
ITGA5-213ENST00000553071 MOGSQ13724 837 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms