RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CYP2C19P33261 490 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 MFSD14CQ5VZR4 134 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 LBX2Q6XYB7 198 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 TMEM179Q6ZVK1 233 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 SIAH1Q8IUQ4 282 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 SPICE1Q8N0Z3 855 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 MOV10L1Q9BXT6 1211 aaKnown RBP13.84□□□□□ -0.19
NEK3-204ENST00000552973 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
NEK3-204ENST00000552973 CHMP4BQ9H444 224 aaKnown RBP13.84□□□□□ -0.19
NEK3-204ENST00000552973 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
NEK3-204ENST00000552973 CDK5RAP2Q96SN8 1893 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 CDK8P49336 464 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 GRB14Q14449 540 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 PLS1Q14651 629 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 C12orf60Q5U649 245 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 STK11IPQ8N1F8 1099 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 GDF15Q99988 308 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 PUS7LQ9H0K6 701 aaKnown RBP13.83□□□□□ -0.2
NEK3-204ENST00000552973 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 SWAP70Q9UH65 585 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
NEK3-204ENST00000552973 COL6A1P12109 1028 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 ERCC3P19447 782 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 DSG3P32926 999 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 MAGEA10P43363 369 aaPredicted RBP13.82□□□□□ -0.2
NEK3-204ENST00000552973 ICA1Q05084 483 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 DPP9Q86TI2 863 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 SPATC1LQ9H0A9 340 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 PLXNB2O15031 1838 aa13.82□□□□□ -0.2
NEK3-204ENST00000552973 RAD21O60216 631 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 FLOT1O75955 427 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 ADORA2AP29274 412 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 ANO1Q5XXA6 986 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 NCAPG2Q86XI2 1143 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 TRPV1Q8NER1 839 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 SENP6Q9GZR1 1112 aaPredicted RBP13.81□□□□□ -0.2
NEK3-204ENST00000552973 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
NEK3-204ENST00000552973 TMX2Q9Y320 296 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 MYH1P12882 1939 aa13.81□□□□□ -0.2
NEK3-204ENST00000552973 A0A1W2PPC1 479 aa13.8□□□□□ -0.2
NEK3-204ENST00000552973 COBLO75128 1261 aa13.8□□□□□ -0.2
NEK3-204ENST00000552973 HOXC6P09630 235 aa13.8□□□□□ -0.2
NEK3-204ENST00000552973 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
NEK3-204ENST00000552973 TSHZ3Q63HK5 1081 aa13.8□□□□□ -0.2
NEK3-204ENST00000552973 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
NEK3-204ENST00000552973 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
NEK3-204ENST00000552973 BMP8BP34820 402 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
NEK3-204ENST00000552973 MDM2Q00987 491 aaPredicted RBP13.79□□□□□ -0.2
NEK3-204ENST00000552973 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 LPAR1Q92633 364 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 UBE2OQ9C0C9 1292 aaKnown RBP13.79□□□□□ -0.2
NEK3-204ENST00000552973 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 ECHDC1Q9NTX5 307 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 FBXO28Q9NVF7 368 aa13.79□□□□□ -0.2
NEK3-204ENST00000552973 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
NEK3-204ENST00000552973 STRNO43815 780 aa13.78□□□□□ -0.2
NEK3-204ENST00000552973 TMEM132BQ14DG7 1078 aa13.78□□□□□ -0.2
NEK3-204ENST00000552973 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
NEK3-204ENST00000552973 SHCBP1Q8NEM2 672 aa13.78□□□□□ -0.2
NEK3-204ENST00000552973 STRBPQ96SI9 672 aaKnown RBP13.78□□□□□ -0.2
NEK3-204ENST00000552973 WDR46O15213 610 aaKnown RBP13.77□□□□□ -0.21
NEK3-204ENST00000552973 IGHA2P01877 340 aa13.77□□□□□ -0.21
NEK3-204ENST00000552973 CYBAP13498 195 aa13.77□□□□□ -0.21
NEK3-204ENST00000552973 DDX60LQ5H9U9 1706 aaKnown RBP13.77□□□□□ -0.21
NEK3-204ENST00000552973 MB21D1Q8N884 522 aa13.77□□□□□ -0.21
NEK3-204ENST00000552973 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
NEK3-204ENST00000552973 MROH8Q9H579 483 aa13.77□□□□□ -0.21
NEK3-204ENST00000552973 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
NEK3-204ENST00000552973 TRIOBPQ9H2D6 2365 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 GSG1L2A8MUP6 293 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 MSCO60682 206 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 OLFML2BQ68BL8 750 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 TDHQ8IZJ6 230 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
NEK3-204ENST00000552973 DCTPP1Q9H773 170 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 MKNK2Q9HBH9 465 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 SLC5A4Q9NY91 659 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
NEK3-204ENST00000552973 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
NEK3-204ENST00000552973 DNM1LO00429 736 aa13.75□□□□□ -0.21
NEK3-204ENST00000552973 PGK2P07205 417 aa13.75□□□□□ -0.21
NEK3-204ENST00000552973 FCER1AP12319 257 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms