RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CLASRPQ8N2M8 674 aaKnown RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 DIS3LQ8TF46 1054 aaKnown RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 TRIB2Q92519 343 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 CRNKL1Q9BZJ0 848 aaKnown RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 GPHNQ9NQX3 736 aaPredicted RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 GJD2Q9UKL4 321 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 NOP58Q9Y2X3 529 aaKnown RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 DDX60LQ5H9U9 1706 aaKnown RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 APBB1O00213 710 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 ATP2B2Q01814 1243 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 TRIM32Q13049 653 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 EDC3Q96F86 508 aaKnown RBP10.52□□□□□ -0.72
TMEM116-217ENST00000552801 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.72
TMEM116-217ENST00000552801 EHD4Q9H223 541 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 CHMP4BQ9H444 224 aaKnown RBP10.52□□□□□ -0.72
TMEM116-217ENST00000552801 TLR7Q9NYK1 1049 aaKnown RBP10.52□□□□□ -0.72
TMEM116-217ENST00000552801 PRKAG2Q9UGJ0 569 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 EXOC6BQ9Y2D4 811 aa10.52□□□□□ -0.72
TMEM116-217ENST00000552801 SIPA1L1O43166 1804 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 SYN1P17600 705 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 SLC9C2Q5TAH2 1124 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 DPP9Q86TI2 863 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 METTL16Q86W50 562 aaKnown RBP10.52□□□□□ -0.73
TMEM116-217ENST00000552801 EAF2Q96CJ1 260 aaPredicted RBP10.52□□□□□ -0.73
TMEM116-217ENST00000552801 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
TMEM116-217ENST00000552801 LBHD1Q9BQE6 289 aaPredicted RBP10.52□□□□□ -0.73
TMEM116-217ENST00000552801 TANGO6Q9C0B7 1094 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 TXNRD2Q9NNW7 524 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 EMILIN3Q9NT22 766 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 MCM9Q9NXL9 1143 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 RBPJLQ9UBG7 517 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
TMEM116-217ENST00000552801 SLC15A5A6NIM6 579 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 MSCO60682 206 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 PEX10O60683 326 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-217ENST00000552801 SHROOM1Q2M3G4 852 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-217ENST00000552801 C12orf42Q96LP6 360 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■□□□□ 8.8
TMEM116-217ENST00000552801 KIAA1683Q9H0B3 1180 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 PORCNQ9H237 461 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 RPAP3Q9H6T3 665 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-217ENST00000552801 SH2D4AQ9H788 454 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 IL1RAPL2Q9NP60 686 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 NDUFB9Q9Y6M9 179 aa10.51□□□□□ -0.73
TMEM116-217ENST00000552801 NAV1Q8NEY1 1877 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 MYH8P13535 1937 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 GOLIM4O00461 696 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 NEFLP07196 543 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 VCAM1P19320 739 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
TMEM116-217ENST00000552801 BMP8BP34820 402 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 JAG1P78504 1218 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 PLS1Q14651 629 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 Q3C1V9 767 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 MORN1Q5T089 497 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 MAP3K21Q5TCX8 1036 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 ERICH6BQ5W0A0 696 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 CEP85Q6P2H3 762 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 KIF1BPQ96EK5 621 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 HOXC10Q9NYD6 342 aa10.5□□□□□ -0.73
TMEM116-217ENST00000552801 PLXNB2O15031 1838 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 ALPK3Q96L96 1907 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 RAD21O60216 631 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 PTPREP23469 700 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 MAGEA10P43363 369 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-217ENST00000552801 COG2Q14746 738 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 CCL14Q16627 93 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 TDHQ8IZJ6 230 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 RHPN1Q8TCX5 695 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
TMEM116-217ENST00000552801 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-217ENST00000552801 ANTXR1Q9H6X2 564 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 SWAP70Q9UH65 585 aa10.49□□□□□ -0.73
TMEM116-217ENST00000552801 KBTBD13C9JR72 458 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 RLBP1P12271 317 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 PDE6AP16499 860 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 PLCD1P51178 756 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 SEPT2Q15019 361 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 TMEM179Q6ZVK1 233 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 ARRDC4Q8NCT1 418 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 ACER1Q8TDN7 264 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 PANK1Q8TE04 598 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 LRCH3Q96II8 777 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 GDF15Q99988 308 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 PRO3102Q9H379 93 aa10.48□□□□□ -0.73
TMEM116-217ENST00000552801 DDX20Q9UHI6 824 aaKnown RBP10.48□□□□□ -0.73
TMEM116-217ENST00000552801 ZNF532Q9HCE3 1301 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms