RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 VWA3AA6NCI4 1184 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 POLRMTO00411 1230 aaKnown RBP12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 KIF1CO43896 1103 aaKnown RBP12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 KLRK1P26718 216 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 NFXL1Q6ZNB6 911 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 MICU3Q86XE3 530 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 PDS5AQ29RF7 1337 aaKnown RBP12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 NID2Q14112 1375 aa12.52□□□□□ -0.41
TUBA1C-209ENST00000552448 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 YEATS4O95619 227 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 TOP1P11387 765 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 PSEN1P49768 467 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 GNG11P61952 73 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 KIF23Q02241 960 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 PPARAQ07869 468 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 TMC4Q7Z404 712 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 SDR42E1Q8WUS8 393 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 MTA3Q9BTC8 594 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 VPS18Q9P253 973 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 UBASH3AP57075 661 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 NCAPHQ15003 741 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 BEND6Q5SZJ8 279 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 PACS2Q86VP3 889 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 CTCFLQ8NI51 663 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 PHKBQ93100 1093 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 ALG1Q9BT22 464 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 RNF41Q9H4P4 317 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 VIPAS39Q9H9C1 493 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 LEMD3Q9Y2U8 911 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
TUBA1C-209ENST00000552448 H3BQF6 201 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 BBOX1O75936 387 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 MCM3P25205 808 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 HOXA10P31260 410 aaPredicted RBP12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 HIBADHP31937 336 aaKnown RBP12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 MYL5Q02045 173 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 DPCR1Q3MIW9 517 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 COL23A1Q86Y22 540 aaPredicted RBP12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 PCDHA7Q9UN72 937 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 CLIC4Q9Y696 253 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
TUBA1C-209ENST00000552448 CCDC196A0A1B0GTZ2 297 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 SERPINC1P01008 464 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 IARSP41252 1262 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 GYS2P54840 703 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 DDR1Q08345 913 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 BAG1Q99933 345 aaPredicted RBP12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 L1RE1Q9UN81 338 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 ECM29Q5VYK3 1845 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 LRRC37AA6NMS7 1700 aa12.49□□□□□ -0.41
TUBA1C-209ENST00000552448 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 IFNAR1P17181 557 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 WTAPQ15007 396 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 KRT40Q6A162 431 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 SECISBP2LQ93073 1101 aaKnown RBP12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 PDE11AQ9HCR9 933 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 TOMM22Q9NS69 142 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 XDHP47989 1333 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
TUBA1C-209ENST00000552448 RCAN1P53805 252 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms