RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 SPATA5Q8NB90 893 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 ANKRD20A12PQ8NF67 263 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 ESR2Q92731 530 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 GSDMAQ96QA5 445 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 BAG1Q99933 345 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 COL16A1Q07092 1604 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-204ENST00000551989 KIF13BQ9NQT8 1826 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 KAT6BQ8WYB5 2073 aa6.13□□□□□ -1.43
CCNT1-204ENST00000551989 PRPF3O43395 683 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TADA3O75528 432 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 DDAH1O94760 285 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 APPP05067 770 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CCDC175P0C221 793 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CYP19A1P11511 503 aaPredicted RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 FECHP22830 423 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CDC27P30260 824 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CASQ1P31415 396 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 IGHMBP2P38935 993 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 PPP1R2P41236 205 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TDO2P48775 406 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 EVA1CP58658 441 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 MDM2Q00987 491 aaPredicted RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 PDE4CQ08493 712 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 GPS2Q13227 327 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 BRD3Q15059 726 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TERF2Q15554 542 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 ELF2Q15723 593 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CCDC152Q4G0S7 254 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 FOCADQ5VW36 1801 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 FBXO38Q6PIJ6 1188 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 SYT10Q6XYQ8 523 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CYB5R4Q7L1T6 521 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 DNAJC10Q8IXB1 793 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF34Q8IZ26 560 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CEP112Q8N8E3 955 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TSC1Q92574 1164 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 RABGGTAQ92696 567 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 DDX12PQ92771 950 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 IQCDQ96DY2 449 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 FAM89AQ96GI7 184 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 ARID3AQ99856 593 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 UBAC1Q9BSL1 405 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 SLC26A6Q9BXS9 759 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 GBP3Q9H0R5 595 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 HSD3B7Q9H2F3 369 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 GREM2Q9H772 168 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 PIH1D3Q9NQM4 214 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 FAM217BQ9NTX9 383 aaPredicted RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 GNL3LQ9NVN8 582 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 RMND1Q9NWS8 449 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TRMT1Q9NXH9 659 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 RAI14Q9P0K7 980 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CALCOCO1Q9P1Z2 691 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TRMT112Q9UI30 125 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 FBXO2Q9UK22 296 aaPredicted RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 MAN1B1Q9UKM7 699 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 TTF2Q9UNY4 1162 aaKnown RBP6.12□□□□□ -1.43
CCNT1-204ENST00000551989 PPP2R2CQ9Y2T4 447 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 PCDHA5Q9Y5H7 936 aa6.12□□□□□ -1.43
CCNT1-204ENST00000551989 CDK5RAP2Q96SN8 1893 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ATAD5Q96QE3 1844 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF804BA4D1E1 1349 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 SYNRGQ9UMZ2 1314 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 A0A0G2JLW4 131 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 A0A1B0GTH6 734 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 CCDC151A5D8V7 595 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 TRIM75PA6NK02 468 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 GSG1L2A8MUP6 293 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 AKR1B15C9JRZ8 316 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 BIN1O00499 593 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 RANBP6O60518 1105 aaKnown RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ZRANB2O95218 330 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 MBD4O95243 580 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 FGRP09769 529 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 SLFN14P0C7P3 912 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 MCM3P25205 808 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 MARCKSP29966 332 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 KRT2P35908 639 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 PNOCQ13519 176 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ARID5BQ14865 1188 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 LONRF3Q496Y0 759 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 CCDC178Q5BJE1 867 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 SPATA1Q5VX52 437 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ARL6IP4Q66PJ3 421 aaKnown RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 OTUD7BQ6GQQ9 843 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF771Q7L3S4 317 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 IQCA1Q86XH1 822 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 TMEM139Q8IV31 216 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 REXO1L1PQ8IX06 675 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 ZNF654Q8IZM8 581 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 CRACR2BQ8N4Y2 399 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 FANCBQ8NB91 859 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 CABLES1Q8TDN4 633 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 HNRNPLLQ8WVV9 542 aaKnown RBP6.11□□□□□ -1.43
CCNT1-204ENST00000551989 GOLGA1Q92805 767 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 LRCH3Q96II8 777 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 BRIP1Q9BX63 1249 aa6.11□□□□□ -1.43
CCNT1-204ENST00000551989 TSPYL1Q9H0U9 437 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms