RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 PRAMEF19Q5SWL8 479 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 AACSQ86V21 672 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 ARRDC4Q8NCT1 418 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 SPATC1LQ9H0A9 340 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 EXOC6BQ9Y2D4 811 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 ATP11BQ9Y2G3 1177 aa26.3■■□□□ 1.8
SMARCD1-212ENST00000551966 SHHQ15465 462 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 CEP85Q6P2H3 762 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 SIAH1Q8IUQ4 282 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 ITPRIPQ8IWB1 547 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 MCM9Q9NXL9 1143 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 PRKAG2Q9UGJ0 569 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 RLFQ13129 1914 aa26.29■■□□□ 1.8
SMARCD1-212ENST00000551966 MPHOSPH10O00566 681 aaKnown RBP26.28■■□□□ 1.8
SMARCD1-212ENST00000551966 SHCBP1Q8NEM2 672 aa26.28■■□□□ 1.8
SMARCD1-212ENST00000551966 SEPT4O43236 478 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 CYP2D6P10635 497 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 PDE6AP16499 860 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 DSG3P32926 999 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 C9orf50Q5SZB4 431 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 SLC9C2Q5TAH2 1124 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 TANGO6Q9C0B7 1094 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 LTBP2Q14767 1821 aa26.27■■□□□ 1.8
SMARCD1-212ENST00000551966 UNC80Q8N2C7 3258 aa26.26■■□□□ 1.79
SMARCD1-212ENST00000551966 SLC44A5Q8NCS7 719 aa26.26■■□□□ 1.79
SMARCD1-212ENST00000551966 SDR42E1Q8WUS8 393 aa26.26■■□□□ 1.79
SMARCD1-212ENST00000551966 CRNKL1Q9BZJ0 848 aaKnown RBP26.26■■□□□ 1.79
SMARCD1-212ENST00000551966 DCP1AQ9NPI6 582 aaPredicted RBP26.26■■□□□ 1.79
SMARCD1-212ENST00000551966 LAMA2P24043 3122 aaKnown RBP26.26■■□□□ 1.79
SMARCD1-212ENST00000551966 TCRBV5S4A2TA0A5A2 114 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 SNX17Q15036 470 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 TRIM60Q495X7 471 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 SH3RF1Q7Z6J0 888 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 FTSJ3Q8IY81 847 aaKnown RBP26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 BADQ92934 168 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 DYNLL2Q96FJ2 89 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 IL1RAPL2Q9NP60 686 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 ZNF236Q9UL36 1845 aa26.25■■□□□ 1.79
SMARCD1-212ENST00000551966 ZNF532Q9HCE3 1301 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 KBTBD13C9JR72 458 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 ADCYAP1R1P41586 468 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 ZNF697Q5TEC3 545 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 CLEC10AQ8IUN9 316 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 LCORLQ8N3X6 602 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 ATG4CQ96DT6 458 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 CDX2Q99626 313 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 MROH8Q9H579 483 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 CUL9Q8IWT3 2517 aa26.24■■□□□ 1.79
SMARCD1-212ENST00000551966 TRIM43BA6NCK2 446 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 MYCNP04198 464 aaPredicted RBP26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 PLS1Q14651 629 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 LRRC41Q15345 812 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 TTF1Q15361 905 aaPredicted RBP26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 TMEM179Q6ZVK1 233 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 ERC1Q8IUD2 1116 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 ABRAQ8N0Z2 381 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 MB21D1Q8N884 522 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 FERMT2Q96AC1 680 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 TRIM43Q96BQ3 446 aaPredicted RBP26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 MAML3Q96JK9 1138 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 SEMA6BQ9H3T3 888 aa26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 PRDM5Q9NQX1 630 aaPredicted RBP26.23■■□□□ 1.79
SMARCD1-212ENST00000551966 A0A0G2JMZ2 1700 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 SMIM22K7EJ46 135 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 NCAPG2Q86XI2 1143 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 SPICE1Q8N0Z3 855 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 RHPN1Q8TCX5 695 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 PDLIM7Q9NR12 457 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 TMX2Q9Y320 296 aa26.22■■□□□ 1.79
SMARCD1-212ENST00000551966 NAV1Q8NEY1 1877 aa26.21■■□□□ 1.79
SMARCD1-212ENST00000551966 FLOT1O75955 427 aa26.21■■□□□ 1.79
SMARCD1-212ENST00000551966 AKR1B1P15121 316 aa26.21■■□□□ 1.79
SMARCD1-212ENST00000551966 SLFNL1Q499Z3 407 aa26.21■■□□□ 1.79
SMARCD1-212ENST00000551966 FAM47AQ5JRC9 791 aa26.21■■□□□ 1.79
SMARCD1-212ENST00000551966 SLC5A4Q9NY91 659 aa26.21■■□□□ 1.79
SMARCD1-212ENST00000551966 GOLIM4O00461 696 aa26.2■■□□□ 1.78
SMARCD1-212ENST00000551966 PRKAB2O43741 272 aa26.2■■□□□ 1.78
SMARCD1-212ENST00000551966 TMEM132BQ14DG7 1078 aa26.2■■□□□ 1.78
SMARCD1-212ENST00000551966 C1orf53Q5VUE5 145 aa26.2■■□□□ 1.78
SMARCD1-212ENST00000551966 ARMT1Q9H993 441 aa26.2■■□□□ 1.78
SMARCD1-212ENST00000551966 ITGB8P26012 769 aa26.19■■□□□ 1.78
SMARCD1-212ENST00000551966 TTYH1Q9H313 450 aaPredicted RBP26.19■■□□□ 1.78
SMARCD1-212ENST00000551966 VCPKMTQ9H867 229 aa26.19■■□□□ 1.78
SMARCD1-212ENST00000551966 SWAP70Q9UH65 585 aa26.19■■□□□ 1.78
SMARCD1-212ENST00000551966 ADAMTS5Q9UNA0 930 aa26.19■■□□□ 1.78
SMARCD1-212ENST00000551966 FCER1AP12319 257 aa26.18■■□□□ 1.78
SMARCD1-212ENST00000551966 TLE2Q04725 743 aa26.18■■□□□ 1.78
SMARCD1-212ENST00000551966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.18■■□□□ 1.78
SMARCD1-212ENST00000551966 DNAJC2Q99543 621 aaKnown RBP26.18■■□□□ 1.78
SMARCD1-212ENST00000551966 ARHGEF10LQ9HCE6 1279 aa26.18■■□□□ 1.78
SMARCD1-212ENST00000551966 SAMD1Q6SPF0 538 aaPredicted RBP26.17■■□□□ 1.78
SMARCD1-212ENST00000551966 PHF24Q9UPV7 400 aa26.17■■□□□ 1.78
SMARCD1-212ENST00000551966 ZNFX1Q9P2E3 1918 aaKnown RBP26.17■■□□□ 1.78
SMARCD1-212ENST00000551966 SMCHD1A6NHR9 2005 aa26.17■■□□□ 1.78
SMARCD1-212ENST00000551966 CYP2D7A0A087X1C5 515 aa26.16■■□□□ 1.78
SMARCD1-212ENST00000551966 PGK2P07205 417 aa26.16■■□□□ 1.78
SMARCD1-212ENST00000551966 TAL1P17542 331 aaPredicted RBP26.16■■□□□ 1.78
SMARCD1-212ENST00000551966 SMAD3P84022 425 aaKnown RBP26.16■■□□□ 1.78
SMARCD1-212ENST00000551966 ICA1Q05084 483 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms