RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
VPS29-209ENST00000551655 A0A1W2PQ45 241 aaPredicted RBP17.83■□□□□ 0.44
VPS29-209ENST00000551655 A0A1W2PQY0 241 aa17.83■□□□□ 0.44
VPS29-209ENST00000551655 MICALL1Q8N3F8 863 aa17.83■□□□□ 0.44
VPS29-209ENST00000551655 MOV10L1Q9BXT6 1211 aaKnown RBP17.83■□□□□ 0.44
VPS29-209ENST00000551655 XPNPEP3Q9NQH7 507 aa17.83■□□□□ 0.44
VPS29-209ENST00000551655 TFCP2Q12800 502 aa17.82■□□□□ 0.44
VPS29-209ENST00000551655 ADGRA1Q86SQ6 560 aa17.82■□□□□ 0.44
VPS29-209ENST00000551655 FOXP4Q8IVH2 680 aaPredicted RBP17.82■□□□□ 0.44
VPS29-209ENST00000551655 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
VPS29-209ENST00000551655 SLC44A5Q8NCS7 719 aa17.82■□□□□ 0.44
VPS29-209ENST00000551655 ACRP10323 421 aa17.81■□□□□ 0.44
VPS29-209ENST00000551655 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
VPS29-209ENST00000551655 LBX2Q6XYB7 198 aa17.81■□□□□ 0.44
VPS29-209ENST00000551655 ALYREFQ86V81 257 aaKnown RBP17.81■□□□□ 0.44
VPS29-209ENST00000551655 RNF39Q9H2S5 420 aa17.81■□□□□ 0.44
VPS29-209ENST00000551655 NKX2-4Q9H2Z4 354 aa17.81■□□□□ 0.44
VPS29-209ENST00000551655 RPAP3Q9H6T3 665 aaPredicted RBP17.81■□□□□ 0.44
VPS29-209ENST00000551655 CXXC1Q9P0U4 656 aaPredicted RBP17.81■□□□□ 0.44
VPS29-209ENST00000551655 A0A0G2JMZ2 1700 aa17.81■□□□□ 0.44
VPS29-209ENST00000551655 MYO5AQ9Y4I1 1855 aaKnown RBP17.8■□□□□ 0.44
VPS29-209ENST00000551655 FAM86C2PA6NEL3 165 aa17.8■□□□□ 0.44
VPS29-209ENST00000551655 TAL1P17542 331 aaPredicted RBP17.8■□□□□ 0.44
VPS29-209ENST00000551655 ERCC3P19447 782 aa17.8■□□□□ 0.44
VPS29-209ENST00000551655 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
VPS29-209ENST00000551655 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
VPS29-209ENST00000551655 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
VPS29-209ENST00000551655 KHSRPQ92945 711 aaKnown RBP eCLIP17.8■□□□□ 0.446e-11■□□□□ 11.2
VPS29-209ENST00000551655 NEUROD6Q96NK8 337 aa17.8■□□□□ 0.44
VPS29-209ENST00000551655 GINM1Q9NU53 330 aa17.8■□□□□ 0.44
VPS29-209ENST00000551655 PIEZO1Q92508 2521 aa17.79■□□□□ 0.44
VPS29-209ENST00000551655 PTPRCP08575 1304 aa17.79■□□□□ 0.44
VPS29-209ENST00000551655 TIMP1P01033 207 aa17.79■□□□□ 0.44
VPS29-209ENST00000551655 UBTFL1P0CB47 393 aaPredicted RBP17.79■□□□□ 0.44
VPS29-209ENST00000551655 MAML3Q96JK9 1138 aa17.79■□□□□ 0.44
VPS29-209ENST00000551655 NOL10Q9BSC4 688 aaKnown RBP17.79■□□□□ 0.44
VPS29-209ENST00000551655 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
VPS29-209ENST00000551655 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
VPS29-209ENST00000551655 ARIH1Q9Y4X5 557 aaPredicted RBP17.79■□□□□ 0.44
VPS29-209ENST00000551655 MUC6Q6W4X9 2439 aa17.79■□□□□ 0.44
VPS29-209ENST00000551655 MYH1P12882 1939 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 TRANK1O15050 2925 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 RARBP10826 455 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 CSF2RAP15509 400 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 MCAMP43121 646 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 ZNF365Q70YC5 407 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 ANKRD33Q7Z3H0 272 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 KIAA1683Q9H0B3 1180 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 C11orf16Q9NQ32 467 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 COPRSQ9NQ92 184 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 TBX21Q9UL17 535 aa17.78■□□□□ 0.44
VPS29-209ENST00000551655 ZNFX1Q9P2E3 1918 aaKnown RBP17.78■□□□□ 0.44
VPS29-209ENST00000551655 DYNLL1P63167 89 aaKnown RBP17.77■□□□□ 0.44
VPS29-209ENST00000551655 TMEM31Q5JXX7 168 aa17.77■□□□□ 0.44
VPS29-209ENST00000551655 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.44
VPS29-209ENST00000551655 MFSD5Q6N075 450 aa17.77■□□□□ 0.44
VPS29-209ENST00000551655 RNF180Q86T96 592 aa17.77■□□□□ 0.44
VPS29-209ENST00000551655 SNRKQ9NRH2 765 aa17.77■□□□□ 0.44
VPS29-209ENST00000551655 LRRC37A2A6NM11 1700 aa17.77■□□□□ 0.44
VPS29-209ENST00000551655 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 STRNO43815 780 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 HLA-DOAP06340 250 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 USP14P54578 494 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 IRX5P78411 483 aaPredicted RBP17.76■□□□□ 0.43
VPS29-209ENST00000551655 PPIGQ13427 754 aaKnown RBP eCLIP17.76■□□□□ 0.43
VPS29-209ENST00000551655 SSH1Q8WYL5 1049 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 STARD7Q9NQZ5 370 aa17.76■□□□□ 0.43
VPS29-209ENST00000551655 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 BAG3O95817 575 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 ARID4AP29374 1257 aaPredicted RBP17.75■□□□□ 0.43
VPS29-209ENST00000551655 GUCY1A2P33402 732 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 ACLYP53396 1101 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 PLS1Q14651 629 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 SKIV2LQ15477 1246 aaKnown RBP17.75■□□□□ 0.43
VPS29-209ENST00000551655 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 TATDN1Q6P1N9 297 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 NCAPG2Q86XI2 1143 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 TOX2Q96NM4 488 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 MSRAQ9UJ68 235 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
VPS29-209ENST00000551655 APBB1O00213 710 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 PGK2P07205 417 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 MYOGP15173 224 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 PLCG2P16885 1265 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 RABGGTBP53611 331 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 PPP4CP60510 307 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 RAB30Q15771 203 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 SHCBP1Q8NEM2 672 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 TANGO6Q9C0B7 1094 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
VPS29-209ENST00000551655 SLC28A3Q9HAS3 691 aa17.74■□□□□ 0.43
VPS29-209ENST00000551655 A0A1W2PRG0 241 aa17.73■□□□□ 0.43
VPS29-209ENST00000551655 MYADML2A6NDP7 307 aa17.73■□□□□ 0.43
VPS29-209ENST00000551655 RFXAPO00287 272 aa17.73■□□□□ 0.43
VPS29-209ENST00000551655 ABCB5Q2M3G0 1257 aa17.73■□□□□ 0.43
VPS29-209ENST00000551655 KIAA1755Q5JYT7 1200 aa17.73■□□□□ 0.43
VPS29-209ENST00000551655 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms