RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 CD248Q9HCU0 757 aa13.77□□□□□ -0.21
ERBB3-219ENST00000551242 CABP5Q9NP86 173 aa13.77□□□□□ -0.21
ERBB3-219ENST00000551242 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
ERBB3-219ENST00000551242 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
ERBB3-219ENST00000551242 RILPL1Q5EBL4 403 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 PAPD7Q5XG87 772 aaKnown RBP13.76□□□□□ -0.21
ERBB3-219ENST00000551242 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 MAPK8IP1Q9UQF2 711 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 DUSP10Q9Y6W6 482 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 CCDC196A0A1B0GTZ2 297 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 TTC26A0AVF1 554 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 ATP1A2P50993 1020 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 PPARAQ07869 468 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
ERBB3-219ENST00000551242 CABS1Q96KC9 395 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-219ENST00000551242 LACRTQ9GZZ8 138 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 HAUS4Q9H6D7 363 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 LY9Q9HBG7 655 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 JADE2Q9NQC1 790 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 STRN4Q9NRL3 753 aa13.76□□□□□ -0.21
ERBB3-219ENST00000551242 DMGDHQ9UI17 866 aaKnown RBP13.76□□□□□ -0.21
ERBB3-219ENST00000551242 WDR19Q8NEZ3 1342 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 RCCD1A6NED2 376 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 PES1O00541 588 aaKnown RBP13.75□□□□□ -0.21
ERBB3-219ENST00000551242 ZEB2O60315 1214 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 FNTAP49354 379 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 SLC7A5Q01650 507 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 UBXN1Q04323 297 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 KCTD16Q68DU8 428 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 ZNF579Q8NAF0 562 aaKnown RBP13.75□□□□□ -0.21
ERBB3-219ENST00000551242 XAGE2Q96GT9 111 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 SH3GL2Q99962 352 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 FAM184BQ9ULE4 1060 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
ERBB3-219ENST00000551242 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERBB3-219ENST00000551242 MST1RQ04912 1400 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 TTMPQ5BVD1 217 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 RRAGBQ5VZM2 374 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
ERBB3-219ENST00000551242 AFDNP55196 1824 aaKnown RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 MACROD2A1Z1Q3 448 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 SEMA3EO15041 775 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 KIAA1328Q86T90 577 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 TSEN2Q8NCE0 465 aaKnown RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 ORAI2Q96SN7 254 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 LRRC1Q9BTT6 524 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 LIMA1Q9UHB6 759 aaKnown RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 ECM29Q5VYK3 1845 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 KCNJ18B7U540 433 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 TDO2P48775 406 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 KCNJ12Q14500 433 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
ERBB3-219ENST00000551242 VPS54Q9P1Q0 977 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 C5P01031 1676 aa13.74□□□□□ -0.21
ERBB3-219ENST00000551242 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
ERBB3-219ENST00000551242 H7C1W4 665 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 IFIT3O14879 490 aaKnown RBP13.73□□□□□ -0.21
ERBB3-219ENST00000551242 CLGNO14967 610 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 IDEP14735 1019 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 GPTP24298 496 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 TCP11X2Q5H9J9 407 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 WDR59Q6PJI9 974 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 TICAM2Q86XR7 235 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 LRRC10BA6NIK2 292 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 ATP2B2Q01814 1243 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 PPARDQ03181 441 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 SH3RF1Q7Z6J0 888 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 OR8K1Q8NGG5 319 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 GSDMAQ96QA5 445 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 SLC52A2Q9HAB3 445 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 SMARCAL1Q9NZC9 954 aa13.73□□□□□ -0.21
ERBB3-219ENST00000551242 WNT7AO00755 349 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 SCP2P22307 547 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 CYP27A1Q02318 531 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 RPGRIP1Q96KN7 1286 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 PSMB7Q99436 277 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 FOXP1Q9H334 677 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-219ENST00000551242 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
ERBB3-219ENST00000551242 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 MEFVO15553 781 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-219ENST00000551242 IFNAR1P17181 557 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 EARS2Q5JPH6 523 aaKnown RBP13.72□□□□□ -0.21
ERBB3-219ENST00000551242 SMCR8Q8TEV9 937 aaPredicted RBP13.72□□□□□ -0.21
ERBB3-219ENST00000551242 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
ERBB3-219ENST00000551242 LUC7L2Q9Y383 392 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms