RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 ERC2O15083 957 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 SPTLC1O15269 473 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 RGS3P49796 1198 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 RHBDL3P58872 404 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 NFIAQ12857 509 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 NNTQ13423 1086 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 PICALMQ13492 652 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 MOB2Q70IA6 237 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 RASAL3Q86YV0 1011 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
KRR1-204ENST00000550898 TEX11Q8IYF3 940 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 ANKRD13AQ8IZ07 590 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 MAGEB6Q8N7X4 407 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 ZNF384Q8TF68 577 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 AIDAQ96BJ3 306 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
KRR1-204ENST00000550898 HAUS7Q99871 368 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.6□□□□□ -1.03
KRR1-204ENST00000550898 ANTXR1Q9H6X2 564 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 PAG1Q9NWQ8 432 aa8.6□□□□□ -1.03
KRR1-204ENST00000550898 AATFQ9NY61 560 aaKnown RBP eCLIP8.6□□□□□ -1.03
KRR1-204ENST00000550898 SOBPA7XYQ1 873 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 WDHD1O75717 1129 aaPredicted RBP8.59□□□□□ -1.03
KRR1-204ENST00000550898 HSPA1AP0DMV8 641 aaKnown RBP8.59□□□□□ -1.03
KRR1-204ENST00000550898 HSPA1BP0DMV9 641 aaKnown RBP8.59□□□□□ -1.03
KRR1-204ENST00000550898 MX1P20591 662 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
KRR1-204ENST00000550898 LDLRAD1Q5T700 205 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 SLC9C2Q5TAH2 1124 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 ZSCAN25Q6NSZ9 544 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 CSRNP1Q96S65 589 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 LIMD1Q9UGP4 676 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 CSADQ9Y600 493 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 CEP350Q5VT06 3117 aa8.59□□□□□ -1.03
KRR1-204ENST00000550898 FAM155AB1AL88 458 aaPredicted RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 AOC2O75106 756 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 USP2O75604 605 aaPredicted RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 GLRX3O76003 335 aaKnown RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 TIMP2P16035 220 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 PDE6AP16499 860 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 GMPRP36959 345 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 QPCTQ16769 361 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 LRRFIP1Q32MZ4 808 aaKnown RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 ADGRA1Q86SQ6 560 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 SMC5Q8IY18 1101 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 MIGA1Q8NAN2 632 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.58□□□□□ -1.04
KRR1-204ENST00000550898 SH3RF3Q8TEJ3 882 aaPredicted RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 SLC10A4Q96EP9 437 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 WRNIP1Q96S55 665 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 ZNF341Q9BYN7 854 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 OSBPL5Q9H0X9 879 aaPredicted RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 DDX4Q9NQI0 724 aaKnown RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
KRR1-204ENST00000550898 FZD1Q9UP38 647 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 ATRNL1Q5VV63 1379 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 MAST2Q6P0Q8 1798 aa8.58□□□□□ -1.04
KRR1-204ENST00000550898 COL2A1P02458 1487 aaPredicted RBP8.57□□□□□ -1.04
KRR1-204ENST00000550898 FLT1P17948 1338 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 ZNF532Q9HCE3 1301 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 MYH13Q9UKX3 1938 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 CA12O43570 354 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 ZBTB48P10074 688 aaPredicted RBP8.57□□□□□ -1.04
KRR1-204ENST00000550898 VARSP26640 1264 aaKnown RBP8.57□□□□□ -1.04
KRR1-204ENST00000550898 CTHP32929 405 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 ADD2P35612 726 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 GJA5P36382 358 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 USP5P45974 858 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 KIF23Q02241 960 aaPredicted RBP8.57□□□□□ -1.04
KRR1-204ENST00000550898 SREBF2Q12772 1141 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 CSPP1Q1MSJ5 1256 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 TSHZ3Q63HK5 1081 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 EDC3Q96F86 508 aaKnown RBP8.57□□□□□ -1.04
KRR1-204ENST00000550898 DHX36Q9H2U1 1008 aaKnown RBP8.57□□□□□ -1.04
KRR1-204ENST00000550898 THSD7BQ9C0I4 1608 aa8.57□□□□□ -1.04
KRR1-204ENST00000550898 TRPM7Q96QT4 1865 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 DDTLA6NHG4 134 aaPredicted RBP8.56□□□□□ -1.04
KRR1-204ENST00000550898 SPDYE5A6NIY4 337 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 IGHDP01880 384 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 HLA-DOAP06340 250 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 ZFYP08048 801 aaPredicted RBP8.56□□□□□ -1.04
KRR1-204ENST00000550898 NR3C2P08235 984 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 DYNLL1P63167 89 aaKnown RBP8.56□□□□□ -1.04
KRR1-204ENST00000550898 NUCB1Q02818 461 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 VGLL4Q14135 290 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 UBE3CQ15386 1083 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 SKIV2LQ15477 1246 aaKnown RBP8.56□□□□□ -1.04
KRR1-204ENST00000550898 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 MIGA2Q7L4E1 593 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 CHD1LQ86WJ1 897 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 MAPKAPK5Q8IW41 473 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 ZFPM1Q8IX07 1006 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 KBTBD3Q8NAB2 608 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 PI4K2BQ8TCG2 481 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 OTUD7AQ8TE49 926 aaPredicted RBP8.56□□□□□ -1.04
KRR1-204ENST00000550898 TGFBRAP1Q8WUH2 860 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms