RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 AXDND1Q5T1B0 1012 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-213ENST00000550831 NOSTRINQ8IVI9 506 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 CCAR1Q8IX12 1150 aaKnown RBP10.61□□□□□ -0.71
TMEM116-213ENST00000550831 CCDC144CPQ8IYA2 1237 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 ELOA2Q8IYF1 753 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-213ENST00000550831 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 MRPS27Q92552 414 aaKnown RBP10.61□□□□□ -0.71
TMEM116-213ENST00000550831 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 FTOQ9C0B1 505 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM116-213ENST00000550831 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 CLIC4Q9Y696 253 aa10.61□□□□□ -0.71
TMEM116-213ENST00000550831 GREB1LQ9C091 1923 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-213ENST00000550831 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 KIF5BP33176 963 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 GUCY1A2P33402 732 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 CDK8P49336 464 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 PLCD1P51178 756 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 APLP1P51693 650 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 FOSBP53539 338 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 TFAP4Q01664 338 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 GRM4Q14833 912 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 STK38Q15208 465 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 IER5LQ5T953 404 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 STRIP1Q5VSL9 837 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 CCDC73Q6ZRK6 1079 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 FMR1NBQ8N0W7 255 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-213ENST00000550831 CERS5Q8N5B7 392 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-213ENST00000550831 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 TIGD1Q96MW7 591 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 GOLPH3LQ9H4A5 285 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 SH3GLB2Q9NR46 395 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 GJB4Q9NTQ9 266 aa10.6□□□□□ -0.71
TMEM116-213ENST00000550831 ME1P48163 572 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 AKAP17AQ02040 695 aaKnown RBP10.59□□□□□ -0.71
TMEM116-213ENST00000550831 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 MAPKAPK5Q8IW41 473 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 DIS3L2Q8IYB7 885 aaKnown RBP10.59□□□□□ -0.71
TMEM116-213ENST00000550831 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-213ENST00000550831 FAM43AQ8N2R8 423 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 SUPT20HQ8NEM7 779 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 ZDHHC15Q96MV8 337 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 VPS33BQ9H267 617 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 MKNK2Q9HBH9 465 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 HPSEQ9Y251 543 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 COL2A1P02458 1487 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-213ENST00000550831 SCN9AQ15858 1988 aa10.59□□□□□ -0.71
TMEM116-213ENST00000550831 BTBD18B2RXH4 712 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 CUTAO60888 179 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 WDHD1O75717 1129 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 BMP15O95972 392 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TSPY3P0CV98 308 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TSPY8P0CW00 308 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 CEBPZQ03701 1054 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TYRO3Q06418 890 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 KIAA2012Q0VF49 1180 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 STK11IPQ8N1F8 1099 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 FSIP1Q8NA03 581 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TNFRSF25Q93038 417 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 DYNLL2Q96FJ2 89 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 EHD4Q9H223 541 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 SWAP70Q9UH65 585 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 MRVI1Q9Y6F6 885 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 MYH8P13535 1937 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 PALM3A6NDB9 673 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 UBE2Q2LH0YL09 131 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 NMT2O60551 498 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 KINO60870 393 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TOMM70O94826 608 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 SCG2P13521 617 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TRAPPC10P48553 1259 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TOB1P50616 345 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 GNL2Q13823 731 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 NPY5RQ15761 445 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 DACT2Q5SW24 774 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 GALNT17Q6IS24 598 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 APOBEC3HQ6NTF7 200 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.722e-7■□□□□ 10.2
TMEM116-213ENST00000550831 TEKT1Q969V4 418 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 SHISA4Q96DD7 197 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 IDI2Q9BXS1 227 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 TTF2Q9UNY4 1162 aaKnown RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 CEP131Q9UPN4 1083 aa10.58□□□□□ -0.72
TMEM116-213ENST00000550831 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-213ENST00000550831 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
TMEM116-213ENST00000550831 PTPREP23469 700 aa10.57□□□□□ -0.72
TMEM116-213ENST00000550831 KRT2P35908 639 aa10.57□□□□□ -0.72
TMEM116-213ENST00000550831 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms