RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 RGMBQ6NW40 437 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 IQCA1Q86XH1 822 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 ZNF280CQ8ND82 737 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 TMEM47Q9BQJ4 181 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 UBAC1Q9BSL1 405 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 CLIP2Q9UDT6 1046 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 KCNH4Q9UQ05 1017 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 MYH6P13533 1939 aa15.88■□□□□ 0.13
ERBB3-215ENST00000550828 TRIM75PA6NK02 468 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 CD2BP2O95400 341 aaKnown RBP15.87■□□□□ 0.13
ERBB3-215ENST00000550828 TTLL1O95922 423 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 SLC10A3P09131 477 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 ATP2B2Q01814 1243 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 PPATQ06203 517 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 MKRN3Q13064 507 aaKnown RBP15.87■□□□□ 0.13
ERBB3-215ENST00000550828 MTMR2Q13614 643 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 Q6ZUG5 572 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 MKL1Q969V6 931 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 HHIPL1Q96JK4 782 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 TMEM87BQ96K49 555 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 BRPF3Q9ULD4 1205 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 STX8Q9UNK0 236 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 TMX2Q9Y320 296 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 SMCHD1A6NHR9 2005 aa15.87■□□□□ 0.13
ERBB3-215ENST00000550828 TOP1P11387 765 aaKnown RBP15.86■□□□□ 0.13
ERBB3-215ENST00000550828 ZNF157P51786 506 aaPredicted RBP15.86■□□□□ 0.13
ERBB3-215ENST00000550828 ZYXQ15942 572 aaKnown RBP15.86■□□□□ 0.13
ERBB3-215ENST00000550828 CYP4F22Q6NT55 531 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 DGKHQ86XP1 1220 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 FBXL16Q8N461 479 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 MS4A4AQ96JQ5 239 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 ZIC5Q96T25 663 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 LARP6Q9BRS8 491 aaKnown RBP15.86■□□□□ 0.13
ERBB3-215ENST00000550828 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 KIAA1683Q9H0B3 1180 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 EMILIN3Q9NT22 766 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
ERBB3-215ENST00000550828 NDUFB10O96000 172 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 LIFRP42702 1097 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 NEK4P51957 841 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 AK2P54819 239 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 BACE1P56817 501 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 WTAPQ15007 396 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 RABEP1Q15276 862 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 IFIT1BQ5T764 474 aaKnown RBP15.85■□□□□ 0.13
ERBB3-215ENST00000550828 SGMS1Q86VZ5 419 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 RAB11FIP4Q86YS3 637 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 BRF1Q92994 677 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 CHMP4CQ96CF2 233 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 ARHGEF10LQ9HCE6 1279 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
ERBB3-215ENST00000550828 A0A0G2JLL6 359 aaPredicted RBP15.84■□□□□ 0.13
ERBB3-215ENST00000550828 CXCL11O14625 94 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 HMGCS2P54868 508 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 APOBRQ0VD83 1088 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 SH3D19Q5HYK7 790 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 PRRT2Q7Z6L0 340 aaPredicted RBP15.84■□□□□ 0.13
ERBB3-215ENST00000550828 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 TBC1D2Q9BYX2 928 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 ALDH8A1Q9H2A2 487 aaPredicted RBP15.84■□□□□ 0.13
ERBB3-215ENST00000550828 VCPKMTQ9H867 229 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 AS3MTQ9HBK9 375 aa15.84■□□□□ 0.13
ERBB3-215ENST00000550828 USP17L10C9JJH3 530 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 F5H6K3 240 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 LARGE1O95461 756 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 ZBTB48P10074 688 aaPredicted RBP15.83■□□□□ 0.12
ERBB3-215ENST00000550828 EVCP57679 992 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 KLRC3Q07444 240 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 TROAPQ12815 778 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 GRM1Q13255 1194 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.12
ERBB3-215ENST00000550828 CCDC178Q5BJE1 867 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 APOA5Q6Q788 366 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 ZNF654Q8IZM8 581 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 SPICE1Q8N0Z3 855 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 PNMA1Q8ND90 353 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 GMCL1P1Q8NEA9 526 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 BRI3BPQ8WY22 251 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 C12orf42Q96LP6 360 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 NUP88Q99567 741 aaPredicted RBP15.83■□□□□ 0.12
ERBB3-215ENST00000550828 FEZ1Q99689 392 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 HPS5Q9UPZ3 1129 aa15.83■□□□□ 0.12
ERBB3-215ENST00000550828 KLF18A0A0U1RQI7 1052 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 AOC2O75106 756 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 SNHG28P0DPA3 235 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 PDHBP11177 359 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 RXRAP19793 462 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 TREML2Q5T2D2 321 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 GPAT2Q6NUI2 795 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 KAT14Q9H8E8 782 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 SYNPO2Q9UMS6 1093 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
ERBB3-215ENST00000550828 ERICH2A1L162 156 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 VCAM1P19320 739 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 ST3GAL1Q11201 340 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 SNAPC2Q13487 334 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 NID2Q14112 1375 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms