RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CNGB1Q14028 1251 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-213ENST00000550629 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
SCAF11-213ENST00000550629 PI16Q6UXB8 463 aa7.64□□□□□ -1.19
SCAF11-213ENST00000550629 NRSN2Q9GZP1 204 aa7.64□□□□□ -1.19
SCAF11-213ENST00000550629 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
SCAF11-213ENST00000550629 CAMTA1Q9Y6Y1 1673 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 COL5A2P05997 1499 aaPredicted RBP7.63□□□□□ -1.19
SCAF11-213ENST00000550629 FBLN1P23142 703 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 PREPP48147 710 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 GP2P55259 537 aaKnown RBP7.63□□□□□ -1.19
SCAF11-213ENST00000550629 NFIAQ12857 509 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 GRM2Q14416 872 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 HSP90AB2PQ58FF8 381 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 MEX3CQ5U5Q3 659 aaKnown RBP7.63□□□□□ -1.19
SCAF11-213ENST00000550629 PRPF40BQ6NWY9 871 aaKnown RBP7.63□□□□□ -1.19
SCAF11-213ENST00000550629 GLIS3Q8NEA6 775 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 TMPRSS13Q9BYE2 586 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 C7orf69Q9H7B7 122 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 PLCH1Q4KWH8 1693 aa7.63□□□□□ -1.19
SCAF11-213ENST00000550629 FAM208AQ9UK61 1670 aaKnown RBP7.63□□□□□ -1.19
SCAF11-213ENST00000550629 MAP2P11137 1827 aaKnown RBP7.62□□□□□ -1.19
SCAF11-213ENST00000550629 WDR17Q8IZU2 1322 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 PNMA6FA0A0J9YX94 578 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 SART1O43290 800 aaKnown RBP7.62□□□□□ -1.19
SCAF11-213ENST00000550629 DIAPH1O60610 1272 aaKnown RBP7.62□□□□□ -1.19
SCAF11-213ENST00000550629 IL13P35225 146 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 TXKP42681 527 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 CHRNA2Q15822 529 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 ENOX2Q16206 610 aaKnown RBP7.62□□□□□ -1.19
SCAF11-213ENST00000550629 FDX2Q6P4F2 183 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 ZDHHC13Q8IUH4 622 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 MYRFLQ96LU7 910 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 C8orf37Q96NL8 207 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 DBNDD2Q9BQY9 259 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 BTG4Q9NY30 223 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 NUDCQ9Y266 331 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 OAS3Q9Y6K5 1087 aaKnown RBP7.62□□□□□ -1.19
SCAF11-213ENST00000550629 BCL9LQ86UU0 1499 aa7.62□□□□□ -1.19
SCAF11-213ENST00000550629 CRB1P82279 1406 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 NCAPD2Q15021 1401 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.61□□□□□ -1.19
SCAF11-213ENST00000550629 ZBTB7CA1YPR0 619 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 MED26O95402 600 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 B3GALT4O96024 378 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 EVA1CP58658 441 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 PTPN12Q05209 780 aaKnown RBP7.61□□□□□ -1.19
SCAF11-213ENST00000550629 EIF4A2Q14240 407 aaKnown RBP7.61□□□□□ -1.19
SCAF11-213ENST00000550629 EXOSC6Q5RKV6 272 aaKnown RBP7.61□□□□□ -1.19
SCAF11-213ENST00000550629 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
SCAF11-213ENST00000550629 UNC5CLQ8IV45 518 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
SCAF11-213ENST00000550629 TRIM42Q8IWZ5 723 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 MRS2Q9HD23 443 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 NLRP2Q9NX02 1062 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 NRAPQ86VF7 1730 aa7.61□□□□□ -1.19
SCAF11-213ENST00000550629 KDRP35968 1356 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 AFF2P51816 1311 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 IGSF1Q8N6C5 1336 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 PATL2C9JE40 543 aaKnown RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 CTSBP07858 339 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 BMP3P12645 472 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 MAOBP27338 520 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 FZD5Q13467 585 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 VPS72Q15906 364 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 RNF43Q68DV7 783 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 ZNF772Q68DY9 489 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 FAM20CQ8IXL6 584 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 SMG8Q8ND04 991 aaKnown RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 ASB16Q96NS5 453 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 TRIM56Q9BRZ2 755 aaKnown RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 KCNF1Q9H3M0 494 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
SCAF11-213ENST00000550629 RGPD1P0DJD0 1748 aa7.6□□□□□ -1.19
SCAF11-213ENST00000550629 SPATA31A5Q5VU36 1347 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 SPATA31A7Q8IWB4 1347 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 HMX2A2RU54 273 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 CYP11A1P05108 521 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 MAPK8P45983 427 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 FCGRTP55899 365 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCAF11-213ENST00000550629 WDR43Q15061 677 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCAF11-213ENST00000550629 POU4F3Q15319 338 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCAF11-213ENST00000550629 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 PNISRQ8TF01 805 aaKnown RBP7.59□□□□□ -1.19
SCAF11-213ENST00000550629 BCO2Q9BYV7 579 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 PNNQ9H307 717 aaKnown RBP7.59□□□□□ -1.19
SCAF11-213ENST00000550629 SUGCTQ9HAC7 445 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 CYP4F12Q9HCS2 524 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 TRPC5Q9UL62 973 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-213ENST00000550629 ATRNO75882 1429 aa7.59□□□□□ -1.19
SCAF11-213ENST00000550629 SPATA31A1Q5TZJ5 1347 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 TIAF1O95411 115 aa7.58□□□□□ -1.2
SCAF11-213ENST00000550629 ECEL1O95672 775 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms