RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 TRIM55Q9BYV6 548 aa8.55□□□□□ -1.04
EFCAB11-203ENST00000550103 BHLHE41Q9C0J9 482 aaPredicted RBP8.55□□□□□ -1.04
EFCAB11-203ENST00000550103 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.55□□□□□ -1.04
EFCAB11-203ENST00000550103 R3HCC1Q9Y3T6 440 aaKnown RBP8.55□□□□□ -1.04
EFCAB11-203ENST00000550103 CACNA1SQ13698 1873 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 F6X3S4 739 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 KLF4O43474 513 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 FBXO24O75426 580 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 HSP90AB1P08238 724 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 PHKG2P15735 406 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 NFKB1P19838 968 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 IRX6P78412 446 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 APOBRQ0VD83 1088 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 RAB33AQ14088 237 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 ZKSCAN2Q63HK3 967 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 AGMOQ6ZNB7 445 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 CCDC84Q86UT8 332 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 JAZF1Q86VZ6 243 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 GOLM1Q8NBJ4 401 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 TSR2Q969E8 191 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 NKD1Q969G9 470 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 NECAB3Q96P71 396 aaPredicted RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 CAMKK2Q96RR4 588 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 CHMP4BQ9H444 224 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 MBIPQ9NS73 344 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 SMC4Q9NTJ3 1288 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 DZANK1Q9NVP4 752 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 MARK1Q9P0L2 795 aa8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 LAS1LQ9Y4W2 734 aaKnown RBP8.54□□□□□ -1.04
EFCAB11-203ENST00000550103 SCN7AQ01118 1682 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 PALLDQ8WX93 1383 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 CHL1O00533 1208 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 GRIA4P48058 902 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 NRLP54845 237 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 PCNX4Q63HM2 1172 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 TTBK2Q6IQ55 1244 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 SLITRK4Q8IW52 837 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 IFNL2Q8IZJ0 200 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 PRKAG3Q9UGI9 489 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 TLR6Q9Y2C9 796 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
EFCAB11-203ENST00000550103 CEMIPQ8WUJ3 1361 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 A0A096LPE4 126 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 CELA3AP09093 270 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 MAPTP10636 758 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 FAM160A1Q05DH4 1040 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 SPEM2Q0P670 501 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TEFQ10587 303 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 R3HDM1Q15032 1099 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TCEAL1Q15170 157 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TXNRD1Q16881 649 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TWISTNBQ3B726 338 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TNNI3KQ59H18 835 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 MCM10Q7L590 875 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 NXPE3Q969Y0 559 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 SRPK1Q96SB4 655 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 SRRTQ9BXP5 876 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 UBP1Q9NZI7 540 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 TSPYL4Q9UJ04 414 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
EFCAB11-203ENST00000550103 KCPQ6ZWJ8 1503 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 DCDC2BA2VCK2 349 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 ENC1O14682 589 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 PLSCR1O15162 318 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 BCAR3O75815 825 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 HOXB7P09629 217 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 GRIN2CQ14957 1233 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 TAF7Q15545 349 aaPredicted RBP8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 RIPOR1Q6ZS17 1223 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 TRIM42Q8IWZ5 723 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 ARHGAP45Q92619 1136 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 ZFP42Q96MM3 310 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 LRRC3Q9BY71 257 aa8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 MRPL42Q9Y6G3 142 aaKnown RBP8.51□□□□□ -1.05
EFCAB11-203ENST00000550103 ANKRD36CQ5JPF3 1778 aa8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 AFDNP55196 1824 aaKnown RBP8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 NFKBIEO00221 500 aa8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 ENPP3O14638 875 aa8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 TFE3P19532 575 aaPredicted RBP8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 LMNB1P20700 586 aa8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 UBAP2LQ14157 1087 aaKnown RBP8.5□□□□□ -1.05
EFCAB11-203ENST00000550103 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms