RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 DIAPH3Q9NSV4 1193 aa20.52■□□□□ 0.88
CHMP1A-208ENST00000550102 ZMYM6O95789 1325 aa20.52■□□□□ 0.87
CHMP1A-208ENST00000550102 HIP1O00291 1037 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 PRDM1O75626 825 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 EEF2P13639 858 aaKnown RBP20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 SDSP20132 328 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 MFAP1P55081 439 aaKnown RBP20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 ZNF589Q86UQ0 364 aaPredicted RBP20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 SIAH1Q8IUQ4 282 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 GPRC5AQ8NFJ5 357 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 PAGR1Q9BTK6 254 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 VCPKMTQ9H867 229 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 TXNRD2Q9NNW7 524 aa20.51■□□□□ 0.87
CHMP1A-208ENST00000550102 ERVK-9P63128 1117 aa20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 ERVK-24P63145 666 aa20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 ALX1Q15699 326 aa20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 LBX2Q6XYB7 198 aa20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 ZNF444Q8N0Y2 327 aaPredicted RBP20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 SH3TC2Q8TF17 1288 aa20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 GABRQQ9UN88 632 aa20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 TNRC18O15417 2968 aaPredicted RBP20.5■□□□□ 0.87
CHMP1A-208ENST00000550102 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 GRK4P32298 578 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 FLT3LGP49771 235 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 SPICE1Q8N0Z3 855 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 SLAIN1Q8ND83 568 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 RBPJLQ9UBG7 517 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 RABGAP1Q9Y3P9 1069 aa20.49■□□□□ 0.87
CHMP1A-208ENST00000550102 ZNF236Q9UL36 1845 aa20.48■□□□□ 0.87
CHMP1A-208ENST00000550102 SPDYE16A6NNV3 312 aaPredicted RBP20.48■□□□□ 0.87
CHMP1A-208ENST00000550102 IRF5Q13568 498 aa20.48■□□□□ 0.87
CHMP1A-208ENST00000550102 KIAA1755Q5JYT7 1200 aa20.48■□□□□ 0.87
CHMP1A-208ENST00000550102 NYAP2Q9P242 653 aa20.48■□□□□ 0.87
CHMP1A-208ENST00000550102 ANAPC4Q9UJX5 808 aa20.48■□□□□ 0.87
CHMP1A-208ENST00000550102 IGKV6D-41A0A0C4DH26 115 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 PEX10O60683 326 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 TSPY3P0CV98 308 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 TSPY8P0CW00 308 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 GSPT1P15170 499 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 MAPK4P31152 587 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 CCNA1P78396 465 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 CTDSPL2Q05D32 466 aa20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 CCAR1Q8IX12 1150 aaKnown RBP20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHMP1A-208ENST00000550102 PDE4DIPQ5VU43 2346 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 ADCY3O60266 1144 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 FLOT1O75955 427 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 COG2Q14746 738 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 POTEEQ6S8J3 1075 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 NEDD1Q8NHV4 660 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 SOCS4Q8WXH5 440 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 CEP95Q96GE4 821 aa20.46■□□□□ 0.87
CHMP1A-208ENST00000550102 RAD21O60216 631 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 CNMDO75829 334 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 FGAP02671 866 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 TMEM106CQ9BVX2 250 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 CWC22Q9HCG8 908 aaKnown RBP20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 MTMR4Q9NYA4 1195 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 HOXC10Q9NYD6 342 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 BIN2Q9UBW5 565 aaPredicted RBP20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 SYNPO2Q9UMS6 1093 aa20.45■□□□□ 0.86
CHMP1A-208ENST00000550102 TSPY2A6NKD2 308 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 ORC4O43929 436 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 TTLL1O95922 423 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 TFAP4Q01664 338 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 FAM47AQ5JRC9 791 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 MB21D1Q8N884 522 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 PXYLP1Q8TE99 480 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 PORCNQ9H237 461 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 CLIP2Q9UDT6 1046 aa20.44■□□□□ 0.86
CHMP1A-208ENST00000550102 POTEFA5A3E0 1075 aa20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 MYCP01106 439 aaPredicted RBP20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 ELNP15502 786 aa20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 UBXN2AP68543 259 aa20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 Q3C1V9 767 aa20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 FAM83BQ5T0W9 1011 aa20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 CENPQQ7L2Z9 268 aaPredicted RBP20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 BTBD7Q9P203 1132 aa20.43■□□□□ 0.86
CHMP1A-208ENST00000550102 NDUFB10O96000 172 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 DSG3P32926 999 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 LRRC47Q8N1G4 583 aaKnown RBP20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 ATG4CQ96DT6 458 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 NUDT12Q9BQG2 462 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 GJD2Q9UKL4 321 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 RAD50Q92878 1312 aa20.42■□□□□ 0.86
CHMP1A-208ENST00000550102 BRCA2P51587 3418 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 F5H6K3 240 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 INHAP05111 366 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 PCP11498 1178 aaKnown RBP20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 HAND2P61296 217 aa20.41■□□□□ 0.86
CHMP1A-208ENST00000550102 KLRC3Q07444 240 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms