RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF713Q8N859 430 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 DAGLBQ8NCG7 672 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 FLAD1Q8NFF5 587 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 SH3RF3Q8TEJ3 882 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 CSRNP2Q9H175 543 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 MAN1B1Q9UKM7 699 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 PCDHA4Q9UN74 947 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 LAMB1P07942 1786 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 DLEC1Q9Y238 1755 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 COL4A1P02462 1669 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 CCDC194A0A1B0GVG4 234 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 GOLGA6L9A6NEM1 432 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 WTIPA6NIX2 430 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-209ENST00000550020 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
TMEM116-209ENST00000550020 MYL1P05976 194 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
TMEM116-209ENST00000550020 TNNT1P13805 278 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 GYS1P13807 737 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-209ENST00000550020 BTDP43251 543 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 PLCD1P51178 756 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 LRMPQ12912 555 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 SYCP1Q15431 976 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 CCDC144BQ3MJ40 725 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 TXNRD3Q86VQ6 643 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 SP8Q8IXZ3 490 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 TEX11Q8IYF3 940 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 ERCC4Q92889 916 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-209ENST00000550020 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 CTAGE1Q96RT6 745 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 COA1Q9GZY4 146 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 SERTAD1Q9UHV2 236 aa10.18□□□□□ -0.78
TMEM116-209ENST00000550020 CCDC88AQ3V6T2 1871 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 ECM29Q5VYK3 1845 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 KLRG2A4D1S0 409 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-209ENST00000550020 CYP2D6P10635 497 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 GNA11P29992 359 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 ALDH1B1P30837 517 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 SPAG1Q07617 926 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 FILIP1LQ4L180 1135 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 SOGA3Q5TF21 947 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 CEP135Q66GS9 1140 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 RCSD1Q6JBY9 416 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 C16orf86Q6ZW13 317 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 KRT25Q7Z3Z0 450 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 NEDD1Q8NHV4 660 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 KIF18AQ8NI77 898 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 SPATA20Q8TB22 786 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 TGFBRAP1Q8WUH2 860 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 CCDC47Q96A33 483 aaKnown RBP10.17□□□□□ -0.78
TMEM116-209ENST00000550020 DHX58Q96C10 678 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 RRP36Q96EU6 259 aaKnown RBP10.17□□□□□ -0.78
TMEM116-209ENST00000550020 SPZ1Q9BXG8 430 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 RTFDC1Q9BY42 306 aaPredicted RBP10.17□□□□□ -0.78
TMEM116-209ENST00000550020 MAGEF1Q9HAY2 307 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 C6orf50Q9HD87 102 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 SEC63Q9UGP8 760 aaKnown RBP10.17□□□□□ -0.78
TMEM116-209ENST00000550020 MYH13Q9UKX3 1938 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
TMEM116-209ENST00000550020 GAKO14976 1311 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 UBE2Q2LH0YL09 131 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 PPEF1O14829 653 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 ZSCAN12O43309 604 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 PARP1P09874 1014 aaKnown RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 HOXA7P31268 230 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 PRPHP41219 470 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 PPP1R2P41236 205 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 CCZ1BP86790 482 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 CCZ1P86791 482 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 PTGDRQ13258 359 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 ZNF174Q15697 407 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 MFSD14BQ5SR56 506 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 SPATA1Q5VX52 437 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 PIK3AP1Q6ZUJ8 805 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 KRT27Q7Z3Y8 459 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 VSTM4Q8IW00 320 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 CCAR2Q8N163 923 aaKnown RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 C17orf53Q8N3J3 647 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 TBC1D16Q8TBP0 767 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
TMEM116-209ENST00000550020 EYA3Q99504 573 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 CUEDC2Q9H467 287 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 FANCLQ9NW38 375 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 SWAP70Q9UH65 585 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 CASZ1Q86V15 1759 aa10.16□□□□□ -0.78
TMEM116-209ENST00000550020 TNRC6CQ9HCJ0 1690 aaKnown RBP10.15□□□□□ -0.78
TMEM116-209ENST00000550020 MYO3BQ8WXR4 1341 aa10.15□□□□□ -0.78
TMEM116-209ENST00000550020 VWA3AA6NCI4 1184 aa10.15□□□□□ -0.78
TMEM116-209ENST00000550020 PALM3A6NDB9 673 aaPredicted RBP10.15□□□□□ -0.78
TMEM116-209ENST00000550020 G3V3G9 751 aa10.15□□□□□ -0.78
TMEM116-209ENST00000550020 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms