RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 USP17L21D6R901 530 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 EN2P19622 333 aaPredicted RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 MX1P20591 662 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 SEPT2Q15019 361 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 ZYXQ15942 572 aaKnown RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 TRMT44Q8IYL2 757 aaKnown RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 PUS7LQ9H0K6 701 aaKnown RBP12.5□□□□□ -0.41
CCDC38-207ENST00000549752 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 RABGAP1Q9Y3P9 1069 aa12.5□□□□□ -0.41
CCDC38-207ENST00000549752 CEP290O15078 2479 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 PRKAB2O43741 272 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-207ENST00000549752 GJB1P08034 283 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 VCAM1P19320 739 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 CDK8P49336 464 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 ERVK-9P63128 1117 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 ERVK-24P63145 666 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
CCDC38-207ENST00000549752 SBK1Q52WX2 424 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 CATSPERGQ6ZRH7 1159 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 C16orf86Q6ZW13 317 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 LPAR1Q92633 364 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
CCDC38-207ENST00000549752 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 NACAP1Q9BZK3 213 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 RNF208Q9H0X6 261 aa12.49□□□□□ -0.41
CCDC38-207ENST00000549752 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 CYP2D6P10635 497 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 CCL5P13501 91 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 ICA1Q05084 483 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 SLFNL1Q499Z3 407 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 LBX2Q6XYB7 198 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
CCDC38-207ENST00000549752 KANSL2Q9H9L4 492 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 HOXC10Q9NYD6 342 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
CCDC38-207ENST00000549752 ZNF236Q9UL36 1845 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 GPAA1O43292 621 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 HMGCRP04035 888 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 APPP05067 770 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 INHAP05111 366 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
CCDC38-207ENST00000549752 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 GJA8P48165 433 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 TDO2P48775 406 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 COG2Q14746 738 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 MTFR1Q15390 333 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 TSHZ3Q63HK5 1081 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 RPAP3Q9H6T3 665 aaPredicted RBP12.47□□□□□ -0.41
CCDC38-207ENST00000549752 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 IVNS1ABPQ9Y6Y0 642 aa12.47□□□□□ -0.41
CCDC38-207ENST00000549752 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 PATL2C9JE40 543 aaKnown RBP12.46□□□□□ -0.41
CCDC38-207ENST00000549752 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
CCDC38-207ENST00000549752 AKR1B1P15121 316 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 ELNP15502 786 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 PDE4AP27815 886 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 RGS2P41220 211 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 MB21D1Q8N884 522 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 OSBP2Q969R2 916 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 TMX2Q9Y320 296 aa12.46□□□□□ -0.41
CCDC38-207ENST00000549752 ROBO3Q96MS0 1386 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
CCDC38-207ENST00000549752 SGPL1O95470 568 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 GPR142Q7Z601 462 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
CCDC38-207ENST00000549752 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
CCDC38-207ENST00000549752 EVI5LQ96CN4 794 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 HTATIP2Q9BUP3 242 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 HMX1Q9NP08 348 aaPredicted RBP12.45□□□□□ -0.42
CCDC38-207ENST00000549752 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 GJD2Q9UKL4 321 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
CCDC38-207ENST00000549752 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms