RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 SAGE1Q9NXZ1 904 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 RIPK3Q9Y572 518 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 ZBBXA8MT70 800 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 ZKSCAN1P17029 563 aaPredicted RBP8.5□□□□□ -1.05
FGD6-205ENST00000549499 FAM109BQ6ICB4 259 aaPredicted RBP8.5□□□□□ -1.05
FGD6-205ENST00000549499 GPR142Q7Z601 462 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 ZGPATQ8N5A5 531 aaKnown RBP8.5□□□□□ -1.05
FGD6-205ENST00000549499 UBA5Q9GZZ9 404 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 NR2E3Q9Y5X4 410 aa8.5□□□□□ -1.05
FGD6-205ENST00000549499 SGPL1O95470 568 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 ADORA2AP29274 412 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 MAGEA10P43363 369 aaPredicted RBP8.49□□□□□ -1.05
FGD6-205ENST00000549499 ERVK-9P63128 1117 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 ERVK-24P63145 666 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 CNTN2Q02246 1040 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 C9orf50Q5SZB4 431 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 OTOP2Q7RTS6 562 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 PRKAG2Q9UGJ0 569 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 DMDP11532 3685 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 DLEC1Q9Y238 1755 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 KNL1Q8NG31 2342 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 KRT40Q6A162 431 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 DEFB128Q7Z7B8 93 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 HOMER1Q86YM7 354 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 CWC27Q6UX04 472 aaKnown RBP8.49□□□□□ -1.05
FGD6-205ENST00000549499 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 FAM227BQ96M60 508 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 LARP6Q9BRS8 491 aaKnown RBP8.49□□□□□ -1.05
FGD6-205ENST00000549499 AGTPBP1Q9UPW5 1226 aa8.49□□□□□ -1.05
FGD6-205ENST00000549499 RFXAPO00287 272 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 RXRAP19793 462 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 GSTO1P78417 241 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 ARHGEF6Q15052 776 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 PKN2Q16513 984 aaKnown RBP8.48□□□□□ -1.05
FGD6-205ENST00000549499 NECAB2Q7Z6G3 386 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 ANKRD35Q8N283 1001 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 OSBP2Q969R2 916 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 TCEANC2Q96MN5 208 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 CRNKL1Q9BZJ0 848 aaKnown RBP8.48□□□□□ -1.05
FGD6-205ENST00000549499 UQCRFS1P1P0C7P4 283 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 LRRC26Q2I0M4 334 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 TTBK2Q6IQ55 1244 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 CMTR1Q8N1G2 835 aaKnown RBP8.48□□□□□ -1.05
FGD6-205ENST00000549499 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
FGD6-205ENST00000549499 DCP1AQ9NPI6 582 aaPredicted RBP8.48□□□□□ -1.05
FGD6-205ENST00000549499 MOGSQ13724 837 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 ZNF444Q8N0Y2 327 aaPredicted RBP8.48□□□□□ -1.05
FGD6-205ENST00000549499 NBPF3Q9H094 633 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
FGD6-205ENST00000549499 TMEM232C9JQI7 657 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 MYBP10242 640 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 CALML3P27482 149 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 MTMR14Q8NCE2 650 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 LRRCC1Q9C099 1032 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 GPR179Q6PRD1 2367 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 TSPY2A6NKD2 308 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 GJB1P08034 283 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 SNRNP48Q6IEG0 339 aaKnown RBP8.47□□□□□ -1.05
FGD6-205ENST00000549499 MOV10L1Q9BXT6 1211 aaKnown RBP8.47□□□□□ -1.05
FGD6-205ENST00000549499 LRRC2Q9BYS8 371 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 A0A0G2JLL6 359 aaPredicted RBP8.47□□□□□ -1.05
FGD6-205ENST00000549499 PTPDC1A2A3K4 754 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 BCRP11274 1271 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 CDK8P49336 464 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 PSMC6P62333 389 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 SLC30A10Q6XR72 485 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 PRRT2Q7Z6L0 340 aaPredicted RBP8.47□□□□□ -1.05
FGD6-205ENST00000549499 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 GINS2Q9Y248 185 aa8.47□□□□□ -1.05
FGD6-205ENST00000549499 COBLO75128 1261 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 SP100P23497 879 aaPredicted RBP8.46□□□□□ -1.05
FGD6-205ENST00000549499 SHMT1P34896 483 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 TFAP4Q01664 338 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 CXCL17Q6UXB2 119 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 TTC6Q86TZ1 520 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 SSH3Q8TE77 659 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 BADQ92934 168 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 PPP2R3BQ9Y5P8 575 aa8.46□□□□□ -1.05
FGD6-205ENST00000549499 GNASQ5JWF2 1037 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 SPRED2Q7Z698 418 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.06
FGD6-205ENST00000549499 NAPBQ9H115 298 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 M0R2C6 588 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 SEMA3EO15041 775 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 GPAA1O43292 621 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 TSPY3P0CV98 308 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 TSPY8P0CW00 308 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 TRIM60Q495X7 471 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 SCLYQ96I15 445 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 PDGFCQ9NRA1 345 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 PNMA3Q9UL41 463 aa8.46□□□□□ -1.06
FGD6-205ENST00000549499 MAP1BP46821 2468 aaKnown RBP8.46□□□□□ -1.06
FGD6-205ENST00000549499 CXCL11O14625 94 aa8.45□□□□□ -1.06
FGD6-205ENST00000549499 DYNC1LI2O43237 492 aaPredicted RBP8.45□□□□□ -1.06
FGD6-205ENST00000549499 ENTPD3O75355 529 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms