RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 VWA3AA6NCI4 1184 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 CCT6AP40227 531 aaKnown RBP13.19□□□□□ -0.3
VDR-206ENST00000549336 SP4Q02446 784 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 CCDC65Q8IXS2 484 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 TCHPQ9BT92 498 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 GH2P01242 217 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 AFMP43652 599 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 CACNA2D4Q7Z3S7 1137 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 DYNLL2Q96FJ2 89 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 ZSWIM5Q9P217 1185 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 WDR19Q8NEZ3 1342 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 CUTAO60888 179 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 KRT13P13646 458 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 TCERG1LQ5VWI1 586 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 DAGLAQ9Y4D2 1042 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 CALCRLQ16602 461 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
VDR-206ENST00000549336 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
VDR-206ENST00000549336 RCAN1P53805 252 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 CACNB3P54284 484 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 GOLGA8HP0CJ92 632 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 SMTNP53814 917 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 SPICE1Q8N0Z3 855 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 ELP1O95163 1332 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 ANKRD26Q9UPS8 1709 aa13.18□□□□□ -0.3
VDR-206ENST00000549336 SH2B2O14492 632 aaPredicted RBP13.17□□□□□ -0.3
VDR-206ENST00000549336 TXKP42681 527 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 ZNF165P49910 485 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 DPP9Q86TI2 863 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 NT5C3AQ9H0P0 336 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 PSMD14O00487 310 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 YEATS4O95619 227 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 SLFN12Q8IYM2 578 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 SLIT2O94813 1529 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 BIN1O00499 593 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 NEMFO60524 1076 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 IFNAR1P17181 557 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 GMPSP49915 693 aaPredicted RBP13.17□□□□□ -0.3
VDR-206ENST00000549336 DNM2P50570 870 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 PDE4DQ08499 809 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 NOSTRINQ8IVI9 506 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
VDR-206ENST00000549336 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 GAS7O60861 476 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 SCARF1Q14162 830 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 ORC4O43929 436 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 JAK2O60674 1132 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
VDR-206ENST00000549336 CTAGE1Q96RT6 745 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
VDR-206ENST00000549336 RPL13P26373 211 aaKnown RBP13.16□□□□□ -0.3
VDR-206ENST00000549336 RASA3Q14644 834 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
VDR-206ENST00000549336 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
VDR-206ENST00000549336 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
VDR-206ENST00000549336 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 CCDC172P0C7W6 258 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 COPB2P35606 906 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 ADCK5Q3MIX3 580 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 FASTKD5Q7L8L6 764 aaKnown RBP13.15□□□□□ -0.3
VDR-206ENST00000549336 OTUD6AQ7L8S5 288 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 hCG_1642624A0A1W2PR95 340 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 GCFC2P16383 781 aaKnown RBP13.15□□□□□ -0.3
VDR-206ENST00000549336 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 DDR1Q08345 913 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
VDR-206ENST00000549336 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms