RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 PARP1P09874 1014 aaKnown RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 HIRAP54198 1017 aaPredicted RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 ICA1Q05084 483 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 TRIM29Q14134 588 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 RRP1BQ14684 758 aaKnown RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 SRBD1Q8N5C6 995 aaKnown RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 TEPSINQ96N21 525 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 NYAP2Q9P242 653 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 MAD2L2Q9UI95 211 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 CNTNAP5Q8WYK1 1306 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 ZC3H4Q9UPT8 1303 aaKnown RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 MYH4Q9Y623 1939 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 PRPF3O43395 683 aaKnown RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 EEF2P13639 858 aaKnown RBP14.01□□□□□ -0.17
PTPRR-209ENST00000549308 OTUD7BQ6GQQ9 843 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 STAG2Q8N3U4 1231 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
PTPRR-209ENST00000549308 MYH6P13533 1939 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 PALM3A6NDB9 673 aaPredicted RBP14□□□□□ -0.17
PTPRR-209ENST00000549308 USP17L5A8MUK1 530 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 GUCY1A2P33402 732 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 JAG1P78504 1218 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 MAP3K10Q02779 954 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 FUT2Q10981 343 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 RESTQ13127 1097 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 HOOK2Q96ED9 719 aa14□□□□□ -0.17
PTPRR-209ENST00000549308 ZSCAN16Q9H4T2 348 aaPredicted RBP14□□□□□ -0.17
PTPRR-209ENST00000549308 V9GY48 417 aaPredicted RBP14□□□□□ -0.17
PTPRR-209ENST00000549308 GOLGA8HP0CJ92 632 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 PDHBP11177 359 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 PTMSP20962 102 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 NBPF12Q5TAG4 269 aaPredicted RBP13.99□□□□□ -0.17
PTPRR-209ENST00000549308 KRT40Q6A162 431 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 USP17L2Q6R6M4 530 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 RASGRP2Q7LDG7 609 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 PIBF1Q8WXW3 757 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 MKL1Q969V6 931 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 CHAMP1Q96JM3 812 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 ZBTB21Q9ULJ3 1066 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 PPP2R3BQ9Y5P8 575 aa13.99□□□□□ -0.17
PTPRR-209ENST00000549308 FRMPD2Q68DX3 1309 aaPredicted RBP13.98□□□□□ -0.17
PTPRR-209ENST00000549308 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 hCG_1642624A0A1W2PR95 340 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 GLTPD2A6NH11 291 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 UBE2Q2LH0YL09 131 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 RAD21O60216 631 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 XBP1P17861 261 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
PTPRR-209ENST00000549308 CAP2P40123 477 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 CCDC96Q2M329 555 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 DCAF15Q66K64 600 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 DCPSQ96C86 337 aaKnown RBP13.98□□□□□ -0.17
PTPRR-209ENST00000549308 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
PTPRR-209ENST00000549308 ARHGEF10LQ9HCE6 1279 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 GJB4Q9NTQ9 266 aa13.98□□□□□ -0.17
PTPRR-209ENST00000549308 RBM27Q9P2N5 1060 aaKnown RBP13.98□□□□□ -0.17
PTPRR-209ENST00000549308 ISY1Q9ULR0 285 aaKnown RBP13.98□□□□□ -0.17
PTPRR-209ENST00000549308 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
PTPRR-209ENST00000549308 ZNF341Q9BYN7 854 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 SNHG28P0DPA3 235 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 EPHX2P34913 555 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 DNM1Q05193 864 aaKnown RBP13.97□□□□□ -0.17
PTPRR-209ENST00000549308 ZNF543Q08ER8 600 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 PKN1Q16512 942 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 USP50Q70EL3 339 aaPredicted RBP13.97□□□□□ -0.17
PTPRR-209ENST00000549308 SIAH1Q8IUQ4 282 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
PTPRR-209ENST00000549308 ATAD5Q96QE3 1844 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 PHF20L1A8MW92 1017 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 ASNSP08243 561 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 SCG2P13521 617 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTPRR-209ENST00000549308 PFKFB3Q16875 520 aaPredicted RBP13.96□□□□□ -0.17
PTPRR-209ENST00000549308 PRAMEF18Q5VWM3 479 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 FAM173BQ6P4H8 233 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 UBA5Q9GZZ9 404 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
PTPRR-209ENST00000549308 IQCA1LA6NCM1 817 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 MMP1P03956 469 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 SMARCA1P28370 1054 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 KRT85P78386 507 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 KIF23Q02241 960 aaPredicted RBP13.95□□□□□ -0.18
PTPRR-209ENST00000549308 SUPT20HL1Q3ZLR7 823 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 GPATCH4Q5T3I0 446 aaKnown RBP13.95□□□□□ -0.18
PTPRR-209ENST00000549308 SULF1Q8IWU6 871 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 RRP36Q96EU6 259 aaKnown RBP13.95□□□□□ -0.18
PTPRR-209ENST00000549308 CPVLQ9H3G5 476 aa13.95□□□□□ -0.18
PTPRR-209ENST00000549308 VAT1LQ9HCJ6 419 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms