RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 CUL4BQ13620 913 aa13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 SLF1Q9BQI6 1058 aa13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 PHF20Q9BVI0 1012 aa13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
RAPGEF3-219ENST00000549151 SLC35F6Q8N357 371 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 MYH3P11055 1940 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 CHD4Q14839 1912 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 MFAP3LO75121 409 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 GYPCP04921 128 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 APTXQ7Z2E3 356 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 RNF225M0QZC1 329 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 CYP2D6P10635 497 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 KRT31Q15323 416 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
RAPGEF3-219ENST00000549151 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 SPATA20Q8TB22 786 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 PANX2Q96RD6 677 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 BCL9O00512 1426 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 XDHP47989 1333 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 PRPF3O43395 683 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 C3orf67Q6ZVT6 689 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 RSRC2Q7L4I2 434 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 IQUBQ8NA54 791 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 RABGGTAQ92696 567 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 NUP98P52948 1817 aa13.5□□□□□ -0.25
RAPGEF3-219ENST00000549151 MYH6P13533 1939 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 TXLNAP40222 546 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 TROAPQ12815 778 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 FERMT2Q96AC1 680 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 GSDMAQ96QA5 445 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 TFR2Q9UP52 801 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 TRIM49BA6NDI0 452 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 KLRK1P26718 216 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 CYP2C19P33261 490 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 KRT9P35527 623 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 HNRNPH2P55795 449 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 CAVIN4Q5BKX8 364 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 BAZ2AQ9UIF9 1905 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 TSPY2A6NKD2 308 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 UBXN1Q04323 297 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 FUT2Q10981 343 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 CNGA4Q8IV77 575 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 RIOK1Q9BRS2 568 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 GUCA1BQ9UMX6 200 aa13.49□□□□□ -0.25
RAPGEF3-219ENST00000549151 PP2D1A8MPX8 630 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 CDKAL1Q5VV42 579 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 ANKRD20A12PQ8NF67 263 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 CDC23Q9UJX2 597 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 SLIT2O94813 1529 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 ERVK-24P63145 666 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 PAK1Q13153 545 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 GPIHBP1Q8IV16 184 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 FUT8Q9BYC5 575 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 MYH8P13535 1937 aa13.48□□□□□ -0.25
RAPGEF3-219ENST00000549151 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 ENC1O14682 589 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 PHACTR2O75167 634 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 LMAN1P49257 510 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 ERFEQ4G0M1 354 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 SH3RF1Q7Z6J0 888 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 PNKPQ96T60 521 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 CHP1Q99653 195 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 MTRQ99707 1265 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 CAMTA2O94983 1202 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 NTSR2O95665 410 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 STAT6P42226 847 aa13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-219ENST00000549151 LRP6O75581 1613 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms