RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 FOXP4Q8IVH2 680 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 EMILIN3Q9NT22 766 aa18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 BAZ2AQ9UIF9 1905 aaKnown RBP18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 MUC3AQ02505 3323 aa18.89■□□□□ 0.61
CHMP1A-206ENST00000549139 RNF113AO15541 343 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 CHGBP05060 677 aa18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 LCORLQ8N3X6 602 aa18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 GTF3C2Q8WUA4 911 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 FAM161BQ96MY7 647 aa18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 FLRT1Q9NZU1 646 aa18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
CHMP1A-206ENST00000549139 CNMDO75829 334 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 MAP2K5Q13163 448 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 LTBP2Q14767 1821 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 APPBP2Q92624 585 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 EVI5LQ96CN4 794 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 PAGR1Q9BTK6 254 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 SENP6Q9GZR1 1112 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 PUS7LQ9H0K6 701 aaKnown RBP18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 ARMT1Q9H993 441 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 ZBTB21Q9ULJ3 1066 aa18.87■□□□□ 0.61
CHMP1A-206ENST00000549139 MBD4O95243 580 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 GDF11O95390 407 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 IGHA2P01877 340 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 HLA-DOAP06340 250 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 TICAM2Q86XR7 235 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 FSD1Q9BTV5 496 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 NCOR1O75376 2440 aa18.86■□□□□ 0.61
CHMP1A-206ENST00000549139 RLFQ13129 1914 aa18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 CENPBP07199 599 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 CCAR1Q8IX12 1150 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 LBHD1Q9BQE6 289 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 DCP1AQ9NPI6 582 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 ATP8A2Q9NTI2 1148 aa18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 DDX20Q9UHI6 824 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 SAP30BPQ9UHR5 308 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 RABGAP1Q9Y3P9 1069 aa18.85■□□□□ 0.61
CHMP1A-206ENST00000549139 MYH8P13535 1937 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 HOXC6P09630 235 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 ZNF697Q5TEC3 545 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 LPAR1Q92633 364 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 OSBP2Q969R2 916 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 C12orf42Q96LP6 360 aa18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 STRBPQ96SI9 672 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 CDX2Q99626 313 aaPredicted RBP18.84■□□□□ 0.61
CHMP1A-206ENST00000549139 PRKAB2O43741 272 aa18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 PTPREP23469 700 aa18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 ATN1P54259 1190 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 MFSD14CQ5VZR4 134 aa18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 CRACR2BQ8N4Y2 399 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 TRPV1Q8NER1 839 aa18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 EHD4Q9H223 541 aa18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 SLC4A4Q9Y6R1 1079 aa18.83■□□□□ 0.6
CHMP1A-206ENST00000549139 SLC15A5A6NIM6 579 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 DNM1LO00429 736 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 MSCO60682 206 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 PDE4AP27815 886 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 RTP1P59025 263 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 SHHQ15465 462 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 ZMYM1Q5SVZ6 1142 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 NPLOC4Q8TAT6 608 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 TRIM34Q9BYJ4 488 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 SEMA6BQ9H3T3 888 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 MCM9Q9NXL9 1143 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 SERPINB13Q9UIV8 391 aa18.82■□□□□ 0.6
CHMP1A-206ENST00000549139 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L15C9J2P7 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L13C9JLJ4 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L11C9JVI0 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L18D6R9N7 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L22D6RA61 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L17D6RBQ6 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L19D6RCP7 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L20D6RJB6 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 PLCD1P51178 756 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 CCNA1P78396 465 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L24Q0WX57 530 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 GRB14Q14449 540 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 C9orf50Q5SZB4 431 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 LBX2Q6XYB7 198 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
CHMP1A-206ENST00000549139 GPAA1O43292 621 aa18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 GH2P01242 217 aa18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 GNAT2P19087 354 aa18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 TATDN1Q6P1N9 297 aa18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
CHMP1A-206ENST00000549139 M0R2C6 588 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 NEFLP07196 543 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 CYBAP13498 195 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 CYP2C19P33261 490 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms