RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 NRAPQ86VF7 1730 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 ITGA6P23229 1130 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 ALX1Q15699 326 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 HSP90B2PQ58FF3 399 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 AKNAD1Q5T1N1 836 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 FAM71BQ8TC56 605 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 STAMQ92783 540 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 SYMPKQ92797 1274 aaKnown RBP15.53■□□□□ 0.08
HDAC7-228ENST00000548938 CCDC51Q96ER9 411 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 ABHD10Q9NUJ1 306 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
HDAC7-228ENST00000548938 AATFQ9NY61 560 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■□□□□ 10
HDAC7-228ENST00000548938 ITGB4P16144 1822 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 AMPD2Q01433 879 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 WTAPQ15007 396 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 KRT31Q15323 416 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 DDB1Q16531 1140 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 EARS2Q5JPH6 523 aaKnown RBP15.53■□□□□ 0.08
HDAC7-228ENST00000548938 VGLL2Q8N8G2 317 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 NUP133Q8WUM0 1156 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 GBP3Q9H0R5 595 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 ARMT1Q9H993 441 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 MYH8P13535 1937 aa15.53■□□□□ 0.08
HDAC7-228ENST00000548938 TRIM75PA6NK02 468 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 PATL2C9JE40 543 aaKnown RBP15.52■□□□□ 0.08
HDAC7-228ENST00000548938 RPS6KA5O75582 802 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 TUBB4BP68371 445 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 TMTC1Q8IUR5 882 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 ZNF512BQ96KM6 892 aaPredicted RBP15.52■□□□□ 0.08
HDAC7-228ENST00000548938 TRIM10Q9UDY6 481 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 SLIT2O94813 1529 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 WNT7AO00755 349 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 SEMA3EO15041 775 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 STARD3NLO95772 234 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 CT47A1Q5JQC4 288 aaPredicted RBP15.52■□□□□ 0.08
HDAC7-228ENST00000548938 MFSD6Q6ZSS7 791 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 ZBTB38Q8NAP3 1195 aaPredicted RBP15.52■□□□□ 0.08
HDAC7-228ENST00000548938 VPS16Q9H269 839 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 FAM204AQ9H8W3 233 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 MYO6Q9UM54 1294 aa15.52■□□□□ 0.08
HDAC7-228ENST00000548938 N4BP3O15049 544 aa15.52■□□□□ 0.07
HDAC7-228ENST00000548938 PRKAB2O43741 272 aa15.52■□□□□ 0.07
HDAC7-228ENST00000548938 MAGEB6Q8N7X4 407 aa15.52■□□□□ 0.07
HDAC7-228ENST00000548938 NUP88Q99567 741 aaPredicted RBP15.52■□□□□ 0.07
HDAC7-228ENST00000548938 KRT23Q9C075 422 aa15.52■□□□□ 0.07
HDAC7-228ENST00000548938 CHD4Q14839 1912 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 LRRC31Q6UY01 552 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 BCL9LQ86UU0 1499 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 GSDMAQ96QA5 445 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 VPS54Q9P1Q0 977 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 WNK3Q9BYP7 1800 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 GSG1L2A8MUP6 293 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 GPTP24298 496 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
HDAC7-228ENST00000548938 CYP26C1Q6V0L0 522 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 MARCH10Q8NA82 808 aaPredicted RBP15.51■□□□□ 0.07
HDAC7-228ENST00000548938 PLEKHA4Q9H4M7 779 aa15.51■□□□□ 0.07
HDAC7-228ENST00000548938 ARID4AP29374 1257 aaPredicted RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 NOP2P46087 812 aaKnown RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 AKAP17AQ02040 695 aaKnown RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 SART3Q15020 963 aaKnown RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 WDR93Q6P2C0 686 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 FANCBQ8NB91 859 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 BLZF1Q9H2G9 400 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 MED4Q9NPJ6 270 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 MYO1AQ9UBC5 1043 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 REXO2Q9Y3B8 237 aaKnown RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 TIAM2Q8IVF5 1701 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 hCG_1642624A0A1W2PR95 340 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 ANKRD65E5RJM6 399 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 RNF40O75150 1001 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 PDE8BO95263 885 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 CYP19A1P11511 503 aaPredicted RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 CHP1Q99653 195 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 HDAC6Q9UBN7 1215 aa15.5■□□□□ 0.07
HDAC7-228ENST00000548938 LIMA1Q9UHB6 759 aaKnown RBP15.5■□□□□ 0.07
HDAC7-228ENST00000548938 XDHP47989 1333 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 ENC1O14682 589 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 PRDM1O75626 825 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 KRT9P35527 623 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 TDO2P48775 406 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 COPB1P53618 953 aaKnown RBP15.49■□□□□ 0.07
HDAC7-228ENST00000548938 NOM1Q5C9Z4 860 aaKnown RBP15.49■□□□□ 0.07
HDAC7-228ENST00000548938 BARGINQ6ZT62 677 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 HELBQ8NG08 1087 aaPredicted RBP15.49■□□□□ 0.07
HDAC7-228ENST00000548938 ACBD3Q9H3P7 528 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 EFCC1Q9HA90 598 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 GUCA1BQ9UMX6 200 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 CCDC196A0A1B0GTZ2 297 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 ERICH2A1L162 156 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 ANKRD18BA2A2Z9 1011 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms