RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
TROAP-208ENST00000548817 NSUN4Q96CB9 384 aaKnown RBP10.38□□□□□ -0.75
TROAP-208ENST00000548817 MTIF3Q9H2K0 278 aaKnown RBP10.38□□□□□ -0.75
TROAP-208ENST00000548817 SLC28A3Q9HAS3 691 aa10.38□□□□□ -0.75
TROAP-208ENST00000548817 NRBP1Q9UHY1 535 aa10.38□□□□□ -0.75
TROAP-208ENST00000548817 LRRC37A2A6NM11 1700 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 DCDC2CA8MYV0 355 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 SMIM22K7EJ46 135 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 STRNO43815 780 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 TIMP1P01033 207 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 POU3F3P20264 500 aaPredicted RBP10.37□□□□□ -0.75
TROAP-208ENST00000548817 KCNQ1P51787 676 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 TFF2Q03403 129 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 RRP1BQ14684 758 aaKnown RBP10.37□□□□□ -0.75
TROAP-208ENST00000548817 CCDC158Q5M9N0 1113 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 TTC39AQ5SRH9 613 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 WDR78Q5VTH9 848 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 NAA16Q6N069 864 aaPredicted RBP10.37□□□□□ -0.75
TROAP-208ENST00000548817 MFSD5Q6N075 450 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 USP17L2Q6R6M4 530 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 NPLOC4Q8TAT6 608 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 DHX36Q9H2U1 1008 aaKnown RBP10.37□□□□□ -0.75
TROAP-208ENST00000548817 SLC5A4Q9NY91 659 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 PI4KBQ9UBF8 816 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 ROBO3Q96MS0 1386 aa10.37□□□□□ -0.75
TROAP-208ENST00000548817 USP17L15C9J2P7 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L13C9JLJ4 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L11C9JVI0 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L18D6R9N7 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L22D6RA61 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L17D6RBQ6 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L19D6RCP7 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L20D6RJB6 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 PI4K2BG5E9Z4 385 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 PQBP1O60828 265 aaKnown RBP10.36□□□□□ -0.75
TROAP-208ENST00000548817 CNMDO75829 334 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 MYCNP04198 464 aaPredicted RBP10.36□□□□□ -0.75
TROAP-208ENST00000548817 ARID4AP29374 1257 aaPredicted RBP10.36□□□□□ -0.75
TROAP-208ENST00000548817 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 ATF7IPQ6VMQ6 1270 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 RNF180Q86T96 592 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 DPP9Q86TI2 863 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
TROAP-208ENST00000548817 TBX21Q9UL17 535 aa10.36□□□□□ -0.75
TROAP-208ENST00000548817 MROH7Q68CQ1 1323 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 TLL1O43897 1013 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 RARBP10826 455 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 FAAP100Q0VG06 881 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 PI16Q6UXB8 463 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 METTL16Q86W50 562 aaKnown RBP10.35□□□□□ -0.75
TROAP-208ENST00000548817 FOXP4Q8IVH2 680 aaPredicted RBP10.35□□□□□ -0.75
TROAP-208ENST00000548817 CLUAP1Q96AJ1 413 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 TSEN34Q9BSV6 310 aaKnown RBP10.35□□□□□ -0.75
TROAP-208ENST00000548817 XPNPEP3Q9NQH7 507 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 SNRKQ9NRH2 765 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
TROAP-208ENST00000548817 AATFQ9NY61 560 aaKnown RBP eCLIP10.35□□□□□ -0.75
TROAP-208ENST00000548817 A0A1W2PQ45 241 aaPredicted RBP10.34□□□□□ -0.75
TROAP-208ENST00000548817 A0A1W2PQY0 241 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 CCER2I3L3R5 266 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
TROAP-208ENST00000548817 IGSF3O75054 1194 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 HLA-DOAP06340 250 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 MCAMP43121 646 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 FOXK2Q01167 660 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 NHLH1Q02575 133 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 SKIV2LQ15477 1246 aaKnown RBP10.34□□□□□ -0.75
TROAP-208ENST00000548817 ANO1Q5XXA6 986 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 C16orf59Q7L2K0 433 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 TMEM199Q8N511 208 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 SH3RF3Q8TEJ3 882 aaPredicted RBP10.34□□□□□ -0.75
TROAP-208ENST00000548817 TGFBRAP1Q8WUH2 860 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 GPR108Q9NPR9 543 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 ZBTB21Q9ULJ3 1066 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 SIPA1L1O43166 1804 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 GBF1Q92538 1859 aa10.34□□□□□ -0.75
TROAP-208ENST00000548817 PRRC2BQ5JSZ5 2229 aaKnown RBP10.33□□□□□ -0.76
TROAP-208ENST00000548817 PNMA6EA0A0J9YXQ4 647 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 FAM86C2PA6NEL3 165 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 SURF6O75683 361 aaKnown RBP10.33□□□□□ -0.76
TROAP-208ENST00000548817 TRIM27P14373 513 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 ADORA2AP29274 412 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 USP14P54578 494 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 CATSPERGQ6ZRH7 1159 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 MAPKAPK5Q8IW41 473 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 ABRAQ8N0Z2 381 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 ZNF384Q8TF68 577 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 NKX2-4Q9H2Z4 354 aa10.33□□□□□ -0.76
TROAP-208ENST00000548817 MOXD2PA6NHM9 499 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 BCAR3O75815 825 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 PPP4CP60510 307 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms