RNA–Protein interactions for RNA: ENST00000548364.5

C12orf54-203, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf54, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-203ENST00000548364 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
C12orf54-203ENST00000548364 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
C12orf54-203ENST00000548364 RPAP3Q9H6T3 665 aaPredicted RBP13.71□□□□□ -0.21
C12orf54-203ENST00000548364 VCPKMTQ9H867 229 aa13.71□□□□□ -0.21
C12orf54-203ENST00000548364 KIAA0100Q14667 2235 aaKnown RBP13.7□□□□□ -0.22
C12orf54-203ENST00000548364 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 RASA1P20936 1047 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 GRK4P32298 578 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 MLLT1Q03111 559 aaPredicted RBP13.7□□□□□ -0.22
C12orf54-203ENST00000548364 PRKCZQ05513 592 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 ALX1Q15699 326 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
C12orf54-203ENST00000548364 ACER1Q8TDN7 264 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 NYAP2Q9P242 653 aa13.7□□□□□ -0.22
C12orf54-203ENST00000548364 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 COPB2P35606 906 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 SOX10P56693 466 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 SEC62Q99442 399 aaKnown RBP13.69□□□□□ -0.22
C12orf54-203ENST00000548364 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
C12orf54-203ENST00000548364 ANAPC4Q9UJX5 808 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 IVNS1ABPQ9Y6Y0 642 aa13.69□□□□□ -0.22
C12orf54-203ENST00000548364 RLFQ13129 1914 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
C12orf54-203ENST00000548364 FLOT1O75955 427 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 TTLL1O95922 423 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
C12orf54-203ENST00000548364 SDSP20132 328 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
C12orf54-203ENST00000548364 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 EVX2Q03828 476 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
C12orf54-203ENST00000548364 COG2Q14746 738 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 TTC22Q5TAA0 569 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 RUFY2Q8WXA3 655 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 P2RX7Q99572 595 aaKnown RBP13.68□□□□□ -0.22
C12orf54-203ENST00000548364 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
C12orf54-203ENST00000548364 CENPFP49454 3210 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 ADCY3O60266 1144 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 CTGFP29279 349 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 FLT3LGP49771 235 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
C12orf54-203ENST00000548364 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
C12orf54-203ENST00000548364 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
C12orf54-203ENST00000548364 COL11A1P12107 1806 aaPredicted RBP13.67□□□□□ -0.22
C12orf54-203ENST00000548364 PDE4DIPQ5VU43 2346 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 ORC4O43929 436 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 HMGCRP04035 888 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 NEFLP07196 543 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
C12orf54-203ENST00000548364 RGS2P41220 211 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 CAP1Q01518 475 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 PLEKHH3Q7Z736 793 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 NEDD1Q8NHV4 660 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 APBA2Q99767 749 aa13.66□□□□□ -0.22
C12orf54-203ENST00000548364 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 RAD21O60216 631 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 XRCC5P13010 732 aaKnown RBP13.65□□□□□ -0.22
C12orf54-203ENST00000548364 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
C12orf54-203ENST00000548364 GPR142Q7Z601 462 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 CLEC10AQ8IUN9 316 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 DSCC1Q9BVC3 393 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 TXNRD2Q9NNW7 524 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 MTMR4Q9NYA4 1195 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
C12orf54-203ENST00000548364 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
C12orf54-203ENST00000548364 PRDM1O75626 825 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 ECM2O94769 699 aaPredicted RBP13.64□□□□□ -0.23
C12orf54-203ENST00000548364 SLC25A27O95847 323 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 FDX1P10109 184 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
C12orf54-203ENST00000548364 DSG3P32926 999 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 CCDC178Q5BJE1 867 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
C12orf54-203ENST00000548364 SPICE1Q8N0Z3 855 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 SLF1Q9BQI6 1058 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 MROH8Q9H579 483 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 GABRQQ9UN88 632 aa13.64□□□□□ -0.23
C12orf54-203ENST00000548364 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
C12orf54-203ENST00000548364 SLC15A5A6NIM6 579 aa13.63□□□□□ -0.23
C12orf54-203ENST00000548364 FOXP2O15409 715 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms