RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 CDH24Q86UP0 819 aa6.61□□□□□ -1.35
RPAP3-206ENST00000548296 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
RPAP3-206ENST00000548296 ZSWIM5Q9P217 1185 aa6.61□□□□□ -1.35
RPAP3-206ENST00000548296 ADAM30Q9UKF2 790 aa6.61□□□□□ -1.35
RPAP3-206ENST00000548296 PCDHB5Q9Y5E4 795 aa6.61□□□□□ -1.35
RPAP3-206ENST00000548296 PF4P02776 101 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 TFE3P19532 575 aaPredicted RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 DNAJA1P31689 397 aaKnown RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 CDK8P49336 464 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 CAMK2GQ13555 558 aaPredicted RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 COL9A2Q14055 689 aaPredicted RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 MAP3K11Q16584 847 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 ANKLE2Q86XL3 938 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 MCATQ8IVS2 390 aaKnown RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 ZSCAN18Q8TBC5 510 aaPredicted RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 ZNF296Q8WUU4 475 aaPredicted RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 SEC16BQ96JE7 1060 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 TRIT1Q9H3H1 467 aaKnown RBP6.6□□□□□ -1.35
RPAP3-206ENST00000548296 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 TJP2Q9UDY2 1190 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 TLR6Q9Y2C9 796 aa6.6□□□□□ -1.35
RPAP3-206ENST00000548296 ROBO2Q9HCK4 1378 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 ATP2B1P20020 1258 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 RPL6Q02878 288 aaKnown RBP6.59□□□□□ -1.35
RPAP3-206ENST00000548296 TNK2Q07912 1038 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 SYDE1Q6ZW31 735 aaPredicted RBP6.59□□□□□ -1.35
RPAP3-206ENST00000548296 FBXO15Q8NCQ5 510 aaPredicted RBP6.59□□□□□ -1.35
RPAP3-206ENST00000548296 ABHD4Q8TB40 342 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 LRRC3Q9BY71 257 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 SLAMF8Q9P0V8 285 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 CEP131Q9UPN4 1083 aa6.59□□□□□ -1.35
RPAP3-206ENST00000548296 F6X3S4 739 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 SNAP47Q5SQN1 464 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 SPOCD1Q6ZMY3 1216 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 PRR23BQ6ZRT6 265 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 TTC6Q86TZ1 520 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 MCF2L2Q86YR7 1114 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 GOLM1Q8NBJ4 401 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 GATAD2BQ8WXI9 593 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 GPATCH2Q9NW75 528 aa6.58□□□□□ -1.36
RPAP3-206ENST00000548296 NFIBO00712 420 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 SOX9P48436 509 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 FAM160A1Q05DH4 1040 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 SLITRK4Q8IW52 837 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 TMEM59LQ9UK28 342 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 KCNH3Q9ULD8 1083 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
RPAP3-206ENST00000548296 LOC105371045A0A1W2PR82 267 aa6.56□□□□□ -1.36
RPAP3-206ENST00000548296 FAM221AA4D161 298 aa6.56□□□□□ -1.36
RPAP3-206ENST00000548296 YARSP54577 528 aaKnown RBP6.56□□□□□ -1.36
RPAP3-206ENST00000548296 RBL2Q08999 1139 aa6.56□□□□□ -1.36
RPAP3-206ENST00000548296 MPP2Q14168 576 aa6.56□□□□□ -1.36
RPAP3-206ENST00000548296 SIAH1Q8IUQ4 282 aa6.56□□□□□ -1.36
RPAP3-206ENST00000548296 MYLIPQ8WY64 445 aa6.56□□□□□ -1.36
RPAP3-206ENST00000548296 JARID2Q92833 1246 aaPredicted RBP6.56□□□□□ -1.36
RPAP3-206ENST00000548296 SYTL4Q96C24 671 aaPredicted RBP6.56□□□□□ -1.36
RPAP3-206ENST00000548296 DPH2Q9BQC3 489 aaPredicted RBP6.56□□□□□ -1.36
RPAP3-206ENST00000548296 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.56□□□□□ -1.36
RPAP3-206ENST00000548296 BPNT1O95861 308 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 ESR1P03372 595 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 TMEM253P0C7T8 217 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 TPP2P29144 1249 aaPredicted RBP6.55□□□□□ -1.36
RPAP3-206ENST00000548296 APOBRQ0VD83 1088 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 CREG2Q8IUH2 290 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 DNAJB8Q8NHS0 232 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
RPAP3-206ENST00000548296 DIRC2Q96SL1 478 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 GPR62Q9BZJ7 368 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 DUSP15Q9H1R2 295 aaPredicted RBP6.55□□□□□ -1.36
RPAP3-206ENST00000548296 NSUN3Q9H649 340 aaKnown RBP6.55□□□□□ -1.36
RPAP3-206ENST00000548296 DCP1AQ9NPI6 582 aaPredicted RBP6.55□□□□□ -1.36
RPAP3-206ENST00000548296 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
RPAP3-206ENST00000548296 PPP1R1BQ9UD71 204 aaPredicted RBP6.55□□□□□ -1.36
RPAP3-206ENST00000548296 SHROOM4Q9ULL8 1493 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 DNAJC25-GNG10A0A024R161 153 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 CILPO75339 1184 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 F13A1P00488 732 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 CFPP27918 469 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 CRKP46108 304 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 CILP2Q8IUL8 1156 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 CYB5D2Q8WUJ1 264 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 NKD1Q969G9 470 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 HIRIP3Q9BW71 556 aaPredicted RBP6.54□□□□□ -1.36
RPAP3-206ENST00000548296 EPB41L4BQ9H329 900 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
RPAP3-206ENST00000548296 HPXP02790 462 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 PLCG1P19174 1290 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 GTF2F1P35269 517 aaKnown RBP eCLIP6.53□□□□□ -1.36
RPAP3-206ENST00000548296 NASPP49321 788 aaPredicted RBP6.53□□□□□ -1.36
RPAP3-206ENST00000548296 HK2P52789 917 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 GAB4Q2WGN9 574 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 TMEM201Q5SNT2 666 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 BNC2Q6ZN30 1099 aaPredicted RBP6.53□□□□□ -1.36
RPAP3-206ENST00000548296 LRRC56Q8IYG6 542 aaPredicted RBP6.53□□□□□ -1.36
RPAP3-206ENST00000548296 OXR1Q8N573 874 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms