RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 PBXIP1Q96AQ6 731 aa8.37□□□□□ -1.07
TMEM116-206ENST00000548283 GBP4Q96PP9 640 aa8.37□□□□□ -1.07
TMEM116-206ENST00000548283 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
TMEM116-206ENST00000548283 FAM13BQ9NYF5 915 aa8.37□□□□□ -1.07
TMEM116-206ENST00000548283 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
TMEM116-206ENST00000548283 IDH1O75874 414 aaKnown RBP8.37□□□□□ -1.07
TMEM116-206ENST00000548283 APLP1P51693 650 aa8.37□□□□□ -1.07
TMEM116-206ENST00000548283 ZNF280AP59817 542 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-206ENST00000548283 FAM177BA6PVY3 158 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 YDJCA8MPS7 323 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 TBC1D12O60347 775 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 C17orf53Q8N3J3 647 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 MKL1Q969V6 931 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 MTMR8Q96EF0 704 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 IL17RBQ9NRM6 502 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 CTIFO43310 598 aaKnown RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 RANBP6O60518 1105 aaKnown RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 DYNLL1P63167 89 aaKnown RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 LRP2BPQ9P2M1 347 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 FRMD4BQ9Y2L6 1034 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 PTPRFP10586 1907 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 RECKO95980 971 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 CALM1P0DP23 149 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 CALM2P0DP24 149 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 CALM3P0DP25 149 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 NPY5RQ15761 445 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 LRSAM1Q6UWE0 723 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 RAVER1Q8IY67 606 aaKnown RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 SH3RF3Q8TEJ3 882 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 ZSCAN10Q96SZ4 725 aaPredicted RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
TMEM116-206ENST00000548283 SH3GLB2Q9NR46 395 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 CNTNAP1P78357 1384 aa8.36□□□□□ -1.07
TMEM116-206ENST00000548283 SASS6Q6UVJ0 657 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 ENAHQ8N8S7 591 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 RBM28Q9NW13 759 aaKnown RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 ANKIB1Q9P2G1 1089 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 SWAP70Q9UH65 585 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 VGLL3A8MV65 326 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 PRPF3O43395 683 aaKnown RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 PKN1Q16512 942 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 MFSD6Q6ZSS7 791 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 AGBL3Q8NEM8 1001 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 BRF1Q92994 677 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 NAPBQ9H115 298 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 FBXO9Q9UK97 447 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 ENTPD3O75355 529 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 BAG3O95817 575 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 CDC27P30260 824 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 CC2D1AQ6P1N0 951 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 ZNF467Q7Z7K2 595 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 RNF26Q9BY78 433 aaPredicted RBP8.35□□□□□ -1.07
TMEM116-206ENST00000548283 RCOR1Q9UKL0 485 aa8.35□□□□□ -1.07
TMEM116-206ENST00000548283 RASA1P20936 1047 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 SMYD5Q6GMV2 418 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 CAVIN1Q6NZI2 390 aaKnown RBP8.34□□□□□ -1.07
TMEM116-206ENST00000548283 ESR2Q92731 530 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 TPX2Q9ULW0 747 aaKnown RBP8.34□□□□□ -1.07
TMEM116-206ENST00000548283 FZD9O00144 591 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 PPP1R37O75864 691 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 RRM1P23921 792 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 APOBRQ0VD83 1088 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 GRM4Q14833 912 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 FILIP1Q7Z7B0 1213 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 FBXO18Q8NFZ0 1043 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 SENP2Q9HC62 589 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.34□□□□□ -1.07
TMEM116-206ENST00000548283 CNTNAP5Q8WYK1 1306 aa8.34□□□□□ -1.07
TMEM116-206ENST00000548283 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.08
TMEM116-206ENST00000548283 ECE2O60344 883 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 TBX4P57082 545 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 CCDC93Q567U6 631 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 CCDC83Q8IWF9 413 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 PAF1Q8N7H5 531 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 MAP7D2Q96T17 732 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 PDGFDQ9GZP0 370 aaPredicted RBP8.34□□□□□ -1.08
TMEM116-206ENST00000548283 RTEL1Q9NZ71 1219 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 ATP6V1DQ9Y5K8 247 aa8.34□□□□□ -1.08
TMEM116-206ENST00000548283 PTPDC1A2A3K4 754 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 ANKRD33BA6NCL7 494 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 BTDP43251 543 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 KCNJ4P48050 445 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 CTDSPL2Q05D32 466 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 TOMM20Q15388 145 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 PPP4R3BQ5MIZ7 849 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 BRAPQ7Z569 592 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 CRACR2BQ8N4Y2 399 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 TTLL6Q8N841 843 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 OSBPL5Q9H0X9 879 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 SFMBT1Q9UHJ3 866 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms